Streptomyces sp. RLB1-33: HEP84_14715
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Entry
HEP84_14715 CDS
T10398
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
strl Streptomyces sp. RLB1-33
Pathway
strl03030
DNA replication
strl03430
Mismatch repair
strl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
strl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HEP84_14715
03430 Mismatch repair
HEP84_14715
03440 Homologous recombination
HEP84_14715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
strl03032
]
HEP84_14715
03400 DNA repair and recombination proteins [BR:
strl03400
]
HEP84_14715
Enzymes [BR:
strl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HEP84_14715
DNA replication proteins [BR:
strl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HEP84_14715
DNA repair and recombination proteins [BR:
strl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HEP84_14715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
PTCB-BRCT
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QIY70235
LinkDB
All DBs
Position
3227971..3228990
Genome browser
AA seq
339 aa
AA seq
DB search
MLEDLTTASSPAPWPAAYPQGYAVVDVETTGLARDDRIISAAVYRLDARGEVEDHWYTMV
NPERDPGPVWIHGLTTDVLEGAPLFQDIAEEFSDRLADRVLVAHNAVFDWSMIAREYARA
QREAPVRQRLCTIALSKELGLPLPNHKLESLAAHFGVVQQRAHHALDDARVLAEAFRPSL
RAAARDGIRLPLLECRPLKEWSESPAAPRIGRQSGSGGYSSGGYSSGGYPSGSWRPSRKR
PACPYPNPGRYEAGKPLKQGMRVAFSGDTSVDRELLEDRAVEAGLHVATSLSRLTSLLVT
NDPDSSTSKVVKAKQFGTPVIDEAAFGQLLRDVAPASEK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagacctgacgaccgcatcgtcaccagccccctggccggccgcgtatccgcag
gggtacgcggtcgtcgacgtggagaccaccggccttgcccgcgacgaccggataatctcg
gccgccgtctaccggctggacgcgcgcggcgaggtcgaggaccactggtacacgatggtc
aacccggagcgggacccgggcccggtctggatccacggtctgacgaccgacgtgctcgaa
ggcgcgccgctcttccaggacatcgccgaggagttctccgaccggctcgccgaccgggtg
ctcgtggcgcacaacgcggtcttcgactggtcgatgatcgcgcgggagtacgcgcgcgcg
cagcgtgaggcgccggtgcgtcagcggctgtgcaccatcgcgctctccaaggagctgggc
ctgccgctgcccaaccacaagctggagtcgctggccgcgcacttcggtgtcgtacagcag
cgggcgcaccacgcgctggacgacgcgcgcgtgctggccgaggcgttccggccgagcctg
cgggccgccgcgcgggacggcatccggctgccgctcctggagtgccggccactcaaggag
tggtccgagagccccgcggcgccgcgcatcggacggcagtccggttccggcggttactcc
tccggcggttattcgtccggtggctatccgtccgggagttggcggccttcacgcaaacgc
cccgcatgcccctatcccaacccaggacgctatgaagcgggcaaaccgctcaagcagggt
atgcgggtcgcgttctccggggacacgtccgtcgaccgcgagctgctggaggaccgtgcc
gtcgaggccggcctgcatgtcgcgacgagcctgtcccggctgaccagcctgctggtcacc
aacgatccggactccagcacgtccaaggtggtcaaggccaaacagttcgggacaccggtg
atcgacgaggcggcgttcggccagctgctgcgggacgtggccccggcctcggagaagtga
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