Streptomyces sp. RLB1-33: HEP84_15840
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Entry
HEP84_15840 CDS
T10398
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
strl Streptomyces sp. RLB1-33
Pathway
strl03030
DNA replication
strl03410
Base excision repair
strl03420
Nucleotide excision repair
strl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
strl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HEP84_15840 (polA)
03410 Base excision repair
HEP84_15840 (polA)
03420 Nucleotide excision repair
HEP84_15840 (polA)
03440 Homologous recombination
HEP84_15840 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
strl03032
]
HEP84_15840 (polA)
03400 DNA repair and recombination proteins [BR:
strl03400
]
HEP84_15840 (polA)
Enzymes [BR:
strl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HEP84_15840 (polA)
DNA replication proteins [BR:
strl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HEP84_15840 (polA)
DNA repair and recombination proteins [BR:
strl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HEP84_15840 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HEP84_15840 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QIY70440
UniProt:
A0A6H1L4A1
LinkDB
All DBs
Position
complement(3476968..3479697)
Genome browser
AA seq
909 aa
AA seq
DB search
MAETASKKTEKTAGAGRPRLMLMDGHSLAYRAFFALPAENFTTATGQPTNAIYGFASMLA
NTLRDEAPTHFAVAFDVSRKTWRSEEFTEYKANRSKTPDEFKGQVELIGELLDAMHAQRF
AVDGFEADDIIATLATQAEAEGFEVLIVTGDRDSFQLVSEHTTVLYPTKGVSELTRFTPE
KVVEKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFGSFADLVERVDEVKG
KAGQNLRDHLEAVKLNRRLTEMVKDVELPKTVTDLERAAYDRTAVVMVLDTLEIRNPSLR
ERLFAVDPGTEEAEAAAPVVEGVELDGAVLGAGELKPWLAEHDGKAVLGLATVDTWALGS
GSVAEVALAAADGAAAWFDPSRLDEADENAFAKWLADPKKPKVLHNAKGAMRVFAEHGWT
IEGVSMDTALAAYLVKPGRRSFALDALSLEYLGRELGPAAAADGQLAFGADDQAEAEALM
VQARTILDLGEAFGEKLAEVGAAELLRDMELPTSALLARLERHGIAADRAHLEAMEQMFA
GAVQQAVKEAHASVGHEFNLGSPKQLQEVFFGELDLPKTKKTKTGYTTDADALAWLATQT
DHELPVIMLRHREQARLRVTVEGLIKTIAADGRIHTTFNQTVAATGRLSSVDPNLQNIPV
RTEEGRAIRRGFVVGEGFESLMTADYSQIELRVMAHLSEDEGLLEAFTSGEDLHTTVASQ
VFSVERSAVDAEMRRKIKAMSYGLAYGLSAFGLSQQLNIDAGEARALMDTYFERFGGVRD
YLRRVVDEARATGYTATLFGRRRYLPDLNSDNRQRREAAERMALNAPIQGTAADIVKIAM
LNVDRALREAELRSRMLLQVHDEIVLEIAPGERAKTEELVRREMASAVHLRAPLDVSVGA
GPDWESAAH
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaaacagcatcgaagaagaccgagaaaaccgcaggtgcgggccgtccgcggctg
atgctcatggatgggcactcgctggcgtaccgcgcgttcttcgcgctgcccgcggagaat
ttcacgaccgcgacgggtcagccgacgaacgcgatctatggtttcgcgtcgatgctggcg
aacacgctgcgcgacgaggcgcccacgcatttcgcggtggcgttcgacgtctcgcgcaag
acgtggcgctccgaggagttcacggagtacaaggcgaaccgttcgaagaccccggacgag
ttcaaggggcaggtcgagctgatcggcgagctgctggacgcgatgcacgcgcagcggttc
gcggtcgacggcttcgaggccgacgacatcatcgcgacgctcgccacgcaggccgaggcc
gagggcttcgaggtcctgatcgtcaccggtgaccgcgactccttccagctggtgtccgag
cacacgacggtgctgtacccgacgaagggcgtctccgagctgacccgcttcactccggag
aaggtcgtcgagaagtacgggttgacgccggcgcagtaccccgacttcgcggcgctgcgc
ggcgacccgtcggacaacctgccgggcatccccggcgtcggcgagaagacggccgcgaag
tggatcaaccagttcggttcgttcgcggacctcgtcgagcgcgtcgacgaggtcaagggc
aaggccgggcagaacctccgcgaccacctggaggcggtgaagctcaaccgccgtctcacg
gagatggtgaaggacgtcgagctcccgaagacggtcaccgacctggagcgcgcggcgtac
gaccgtacggcggtcgtgatggtcctggacaccctggagatccgtaacccctccctgcgt
gagcggctcttcgccgtcgaccccgggacggaggaggccgaggcggccgctccggtcgtc
gagggtgtcgagctggacggggccgtgctgggtgcgggcgagctgaagccgtggctcgcc
gagcacgacggcaaggcggtcctgggtctggccaccgtcgacacctgggcgctgggttcg
ggctcggtggccgaggtcgcgctcgccgcggcggacggagcggcggcgtggttcgacccc
tcgcggctggacgaggccgacgagaacgcgttcgcgaagtggctcgccgacccgaagaag
cccaaggtgctgcacaacgccaagggtgcgatgcgggtcttcgccgagcacgggtggacg
atcgagggcgtgtccatggacaccgcgctcgccgcgtatctggtgaagccgggccgccgc
tccttcgcgctggacgcgctgtccctggagtacctgggccgggagctggggcccgctgcc
gcggccgacggtcagctggccttcggcgcggacgaccaggccgaggccgaggcgctgatg
gtgcaggcccgcacgatcctcgacctgggcgaggcgttcggcgagaagctggcggaggtc
ggcgcggccgagctgctgcgcgacatggagctgcccacgtcggcgctgctggcccggctg
gagcggcacggcatcgcggcggaccgggcgcacctggaagccatggagcagatgttcgcc
ggagccgtgcagcaggcggtgaaggaggcccacgcctccgtcgggcacgagttcaacctc
ggctcgcccaagcagctccaggaggtcttcttcggcgagctggacctgcccaagacgaag
aagacgaagaccggttacacgacggacgcggacgcgctggcctggctggccacgcagacc
gaccacgagctgccggtcatcatgctgcgccaccgtgagcaggccaggctgcgggtgacg
gtcgagggtctgatcaagacgatcgccgcggacggccgcatccacaccacgttcaaccag
acggtggccgcgacgggccggctctcgtcggtggacccgaacctgcagaacatcccggtc
cgtacggaggagggccgcgcgatccgccgcggcttcgtggtcggcgagggcttcgaatcc
ctcatgacggccgactacagccagatcgaactgcgcgtgatggcccatctgtccgaggac
gagggcctgttggaggcgttcacgtcgggcgaggacctgcacacgacggtggcgtcgcag
gtgttctcggtcgagcgttcggcggtcgatgcggagatgcgccgcaagatcaaggcgatg
tcgtacggccttgcctacgggctgtcggcgttcggtctctcccagcagctgaacatcgac
gcgggtgaggcgcgtgcgttgatggacacgtacttcgagcgtttcggcggggtgcgggac
tatctgcgccgggtggtcgacgaggcccgcgccacgggctacacggcgacgctcttcggg
cgccgccgctatctgcccgacctcaacagcgacaaccggcagcgtcgcgaggccgccgag
cgcatggcgctcaacgcccccatccagggcacggccgcggacatcgtcaagatcgcgatg
ctgaacgtggaccgggcgctgcgcgaggccgagctcaggtcccgcatgctcctccaggtc
cacgacgaaatcgtcctggagatcgcccccggagagcgcgcgaagaccgaggaactcgtc
cgccgcgagatggcgtccgccgttcatctccgggcgcccctcgacgtgtccgtcggggcg
ggccccgactgggaatccgcggcgcactag
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