Streptomyces sp. RLB1-33: HEP84_16530
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Entry
HEP84_16530 CDS
T10398
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
strl Streptomyces sp. RLB1-33
Pathway
strl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
strl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HEP84_16530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strl03400
]
HEP84_16530
Enzymes [BR:
strl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
HEP84_16530
DNA repair and recombination proteins [BR:
strl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HEP84_16530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QIY70559
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All DBs
Position
3637043..3637912
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AA seq
289 aa
AA seq
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MTSKQLRNPVGGHVPVAGGLSSVGLTYAREMGAETVQVFVANPRGWATPVGSPRQDEEFR
AACAAESIPAYVHAPYLINFGSHTEATVEKSVESLRHSLRRGREIGALGVVVHTGSATGG
RERSVALEQVREHLLPLLDELTHDDDPYLLLESTAGQGASLCSRTWDFGPYFEALDAHPK
LGVCLDTCHIYAAGHDLTGPSGMHQTLDLLVDTVGEGRLKLIHANDSKDVVGAHKDRHEN
IGSGHIGEDPFRALMTHPATEGVPLIIETPGGKEGHAADVERLKKLRDG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgaccagcaagcagctccgcaaccccgtcggcggccatgtccccgtggccggcggcctc
agctccgtcggcctgacctacgcacgcgagatgggcgccgagaccgtccaggtcttcgtc
gccaacccgcgcggctgggcgacgcccgtcggcagtccccgccaggacgaggagttccgg
gcggcctgtgccgccgagtcgatccccgcgtacgtccatgccccgtatctgatcaacttc
ggctcgcacaccgaggcgacggtcgagaagtcggtggagtcgctgcggcactcgctgcgg
cggggccgggagatcggggcgctcggcgtggtcgtgcacacggggagcgccaccgggggc
cgggagcggtccgtcgccctggagcaggtacgtgagcatctgctgcccctgctggacgag
ctgacgcatgacgacgacccgtatctgctcctggagtcgaccgcgggccagggcgcctcg
ctctgctcgcgcacctgggacttcgggccgtacttcgaggcgctggacgcccatccgaag
ctgggcgtgtgcctcgacacctgccacatctacgcggcggggcacgacctgaccgggccg
agcggcatgcaccagacactcgacctgctggtggacacggtcggcgagggccggctcaag
ctgatccacgccaacgactccaaggacgtggtcggcgcccacaaggaccgccacgagaac
atcggctccggtcacatcggcgaggacccgttccgcgcgctgatgacccaccccgccacc
gagggcgtacccctgatcatcgagacgccgggcgggaaggaggggcacgcggcggacgtg
gagcgcctgaaaaaactcagggacggctga
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