Streptomyces sp. RLB1-33: HEP84_20335
Help
Entry
HEP84_20335 CDS
T10398
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
strl Streptomyces sp. RLB1-33
Pathway
strl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
strl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HEP84_20335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strl03400
]
HEP84_20335
Enzymes [BR:
strl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HEP84_20335
DNA repair and recombination proteins [BR:
strl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HEP84_20335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
AAA_22
HHH_5
Helicase_RecD
PIF1
AAA_16
NPHP3_N
HTH_IclR
TraI_hel_assoc_N
nSTAND3
PhoH
DEAD
AAA
UvrD_C
SLFN-g3_helicase
HTH_29
ABC_tran
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
QIY71176
UniProt:
A0A6H1KW27
LinkDB
All DBs
Position
complement(4496630..4498894)
Genome browser
AA seq
754 aa
AA seq
DB search
MSNQAGNRQVQLAVVEGVLERITYANEENGYTVARVDTGRGAGDLLTVVGALLGAQVGES
LRMEGRWGSHPQYGKQFTVENYTTVLPATVQGIRRYLGSGLVKGIGPIFADRITQHFGLD
TLQIIEEEPKRLIEVPGLGPKRTKKIADAWEEQKAIKEVMLFLQTVEVSTSIAVRIYKKY
GDASISVVKNQPYRLAADVWGIGFLTADKIAQSVGIPHDSPERVKAGLQYALSQSADQGH
CFLPEEQLIADAVKLLQVDTGLVIECLAELAEPTEDENEPGGVREPGVVREKVPGPDGGP
DTVTAVYLVPFHRAELSLSAQLLRLLRTTEDRMPGFHDVAWDKALTWLKGRTGAELAPGQ
EEAVRLALTKKVAVLTGGPGCGKSFTVRSIVELARAKRAKVVLAAPTGRAAKRLAELTGA
DASTVHRLLELKPGGDAAYDKDRPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVG
DVDQLPSVGAGEVLRDLLADRSPIPSVRLTQVFRQAQQSGVVTNAHRINSGQHPVTDGMK
DFFLFVEDETEEAGRLTVDVAARRIPARFGLDPRRDIQVLAPMHRGPAGAGTLNGLLQQA
ITPGRPDLPEKRFGGRVFRVGDKVTQVRNNYEKGENGVFNGTVGVVTSLDSEEQRLTVLT
DEDEEVPYDFDELDELAHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAK
KLVVLVGSRKAIGQAVRTVSAGRRHTSLDHRLTT
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatcaggcggggaaccggcaggtgcaactggcggtcgtcgagggcgtgctcgaa
cggatcacgtacgccaacgaggagaacgggtacacggtcgcgagggtggacaccggccgc
ggcgccggcgatctgctcaccgtcgtgggcgcactcctcggcgcccaggtgggcgagtcg
ctccggatggagggccgttggggctcccacccgcagtacggcaagcagttcacggtggag
aactacacgaccgtcctgcccgccaccgtccagggcatccgccgctacctcggctccggc
ctggtcaagggcatcggcccgatcttcgccgaccgcatcacccagcacttcgggctggac
acgctccagatcatcgaggaggagccgaagcgcctcatcgaggtccccggcctcggtccc
aagcgcacgaagaagatcgccgacgcctgggaggagcagaaggcgatcaaggaggtcatg
ctcttcctccagaccgtcgaggtgtcgacgtcgatcgcggtgcgcatctacaagaagtac
ggcgacgcgtcgatctcggtcgtcaagaaccagccctaccgcctggccgccgacgtctgg
ggcatcggcttcctcaccgccgacaagatcgcccagtccgtcggcatcccgcacgacagc
cccgagcgcgtcaaggcgggccttcagtacgccctgtcgcagtccgccgaccagggccac
tgcttcctccccgaggagcagctgatcgccgacgcggtgaagctgctccaggtggacacg
ggcctggtcatcgaatgcctggcggaactggcggagccgaccgaggacgagaacgaaccc
ggtggcgtacgggagccgggcgtcgtacgcgagaaggtccccggtcccgacggcggcccg
gacaccgtcacggccgtctacctggtccccttccaccgcgccgaactctccctctccgca
cagctgttgcgcctcctgcgcaccaccgaggaccggatgcccggtttccacgacgtggcc
tgggacaaggcactgacctggctgaaggggcgtacgggcgcggagttggcgcccggtcag
gaggaggccgtccggctggcgctcaccaagaaggtcgcggtgctcaccggcggccccggc
tgcggcaagtcgttcacggtccgctcgatcgtggagctggcgcgcgccaagcgggcgaag
gtcgtgctcgcggcgccgacgggccgtgccgccaagcgactcgccgagctgaccggagcg
gacgcctccaccgtgcaccggctcctggagctcaagccgggcggggacgcggcgtacgac
aaggaccggccgctggacgccgacctggtggtcgtggacgaggcctccatgctcgacctc
ctcctcgccaacaagctggtcaaggcggtgccgccgggcgcccacctgctgttcgtcggg
gacgtcgaccaactccccagcgtcggcgccggcgaggtcctgcgcgacctgctcgccgac
cggagccccatcccctccgtccgtctgacccaggtcttccgccaggcccagcagtccgga
gtggtgacgaacgcgcaccggatcaactccgggcagcaccccgtcaccgacggcatgaag
gacttcttcctcttcgtcgaggacgagaccgaggaggccgggcggctcaccgtggatgtg
gcggcacggcggattccggccaggttcgggctcgacccgcgccgggacatccaggtgctg
gcgcccatgcaccgcggcccggcgggcgcgggcaccctcaacggcctgttgcagcaggcg
atcacgcccggccgccccgacctgcccgaaaagcgcttcggcggccgggtcttccgggtc
ggcgacaaggtgacccaagtccgcaacaactacgaaaaaggggagaacggcgtcttcaac
ggcaccgtgggcgtggtcacctcactcgactccgaggagcagcgtctgacggtgctgacg
gacgaggacgaggaggtcccctacgacttcgacgaactcgacgagctggcccacgcgtac
gcggtgacgatccaccgctcccagggcagtgagtaccccgcggtggtgatcccggtcacc
accggcgcgtggatgatgctccagcgcaacctgctctacacggcggtcacccgggccaag
aagctcgtcgtcctggtcggctcccgcaaggcgatcggccaggcggtccgcacggtgtcg
gcgggccgccgccacacatccctcgatcaccgcctcaccacgtga
DBGET
integrated database retrieval system
