Streptomyces sp. RLB1-33: HEP84_25120
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Entry
HEP84_25120 CDS
T10398
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
strl Streptomyces sp. RLB1-33
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Gene cluster
GFIT
Motif
Pfam:
NPCBM
Sigma70_r2
zf-HC2
Sigma70_r4_2
PhyR_sigma2
Motif
Other DBs
NCBI-ProteinID:
QIY71949
UniProt:
A0A6H1L7T3
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Position
5585813..5587789
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AA seq
658 aa
AA seq
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MSVDGRDESLGDGGAEAGGSPSRQVPSQGGPSGITSEPSGTPGVSGASGGSGASGAPRDP
SVPAQRDRFDRRDGGNVLPPPIELPPSDADLIGRMRAGDDTAYEELYRRHAEAVRRYART
CCRDAYTADDLTAEVFARMLQAVRRGHGPEHAVRAYLLTTVRRVAASWTKSAKREQLVDD
FAVFAAQSSRTSEVSDDDTLDLGADVRAMHEAEQSMAMQAFRSLPERWQAVLWHTEVEDE
SPSEVATLFGLDANGTRVLASRAREGLKQAYLQAHVSITLTMDDECARYADRLGAYARGG
LRTRAERGLRKHLEECAKCRLAAGQIKEVASGIPAVVPVAVIGWFGAAGYAKAVALIAGG
AGAGAAGAVGAAAASGGSGGASAGGGAAASQGLGAPVKAGIAAGVVAVAAAAVALALVGN
GSPVKKPEAKPPATSPVVEAPQPQPTPTPSKKPAPQSPVMAPAPTPSPTPTPTPRPTLKP
TPTPTPSPTPTRANPKPTPTPTPTPTPTPPPPPAPVVYQWNELKYGVTGDHTKPEMRLGE
SSWVWQRWGVSIAGQRYTHGVTVHGESSVTIDLNRSCSAYDALVGVDDLTLGLGQVSFSV
YADGARLWQSPLVKGGDPAIPVHVSLNGRKTIRLAVEPHTRFDAVALADWAESTFQCR
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgacgggcgggacgagtcactcggtgacggtggcgcggaggccggcgggtcg
ccctcgcggcaggtaccgagccagggcggcccgtcgggcatcacctcggaaccctcgggt
acgccgggtgtttcaggcgcatcgggtggttcaggcgcttcgggcgctccaagggacccc
agtgttccggcgcagcgcgaccggttcgaccggcgggacggcgggaacgtcctgccgccc
ccgatcgagctgccgccctccgacgccgatctgatcgggcggatgcgcgcgggcgacgac
acggcgtacgaggagttgtaccgccgtcacgccgaagccgtccgtcgctatgcccgcacc
tgctgccgggacgcgtacaccgcggacgacctcaccgccgaggtgttcgcccgcatgctc
caggcggtccggcgcggccacggccccgagcacgccgtacgcgcgtatctgctcaccacg
gtccgccgcgtcgccgcgagctggacgaagtccgcgaagcgagagcaactggtcgacgac
ttcgcggtgttcgccgcgcagtcctcccgcacctccgaggtgtccgacgacgacacgctg
gacctgggcgccgacgtacgggcgatgcacgaggccgagcagtccatggccatgcaagcg
ttccggtcgctgccggagcgctggcaggccgtgctgtggcacacggaggtcgaggacgag
tccccgagcgaggtcgccacgctcttcgggctcgacgccaacggcacccgcgtcctggcc
agccgcgcccgcgagggcctcaagcaggcctacctccaggcacacgtcagcatcacgctc
accatggacgacgagtgcgcgcgctacgccgaccggctcggcgcctacgcccggggcggc
ctgcgcacccgggccgagcgcggactgcgcaagcacctggaggagtgcgccaagtgccgg
ctggccgcgggccagatcaaggaagtcgccagcgggatccccgcggtcgtgccggtcgcg
gtcatcggttggttcggtgccgccgggtacgcgaaggccgtcgcgctcatcgccggtggc
gccggagcgggcgcggccggagcggtgggggccgcggcggcgagcggcggctcgggcggg
gcgagcgccgggggcggcgcggccgcctcccaggggctcggcgcgccggtcaaggccggt
atcgcggcgggagtcgtcgcggtggccgcggcggcggtggcactcgccctcgtcggcaac
ggcagcccggtcaagaagcccgaggccaagccgccggcgacctcgccggtggtcgaagcg
ccacagccgcagccgacgccgactccgtcgaagaagcccgcgccacagtccccggtgatg
gcccccgcaccgacgcccagcccgaccccgactcccactccccggcccaccctgaagccc
acgcccacgcccacgccgtcccccaccccgacgcgggcgaatccgaagcccacccctact
ccgactcccactccgacgcccaccccgccgccgcctcccgcaccggtcgtctaccagtgg
aacgagttgaagtacggcgtcaccggtgaccacaccaagcccgagatgcggctcggcgag
agcagttgggtgtggcagcggtggggggtgtcgatcgcgggtcagcggtacacccacggc
gtgaccgtgcacggcgagtcctcggtcaccatcgacctcaaccgcagttgctcggcgtac
gacgcgctggtcggcgtggacgacctgacgctgggcctcggccaggtgagcttctccgtg
tacgccgacggagctcgcctgtggcagtcgccactggtcaagggcggcgaccccgcgatc
cccgtgcatgtgagcctcaacggccgcaaaacgattcggctggccgtcgaaccgcacacg
agattcgacgcggtggccctggcggactgggcggagtccacgttccagtgccggtga
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