Streptomyces sp. RLB1-33: HEP84_28725
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Entry
HEP84_28725 CDS
T10398
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
strl Streptomyces sp. RLB1-33
Brite
KEGG Orthology (KO) [BR:
strl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
strl03032
]
HEP84_28725 (topA)
03400 DNA repair and recombination proteins [BR:
strl03400
]
HEP84_28725 (topA)
Enzymes [BR:
strl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HEP84_28725 (topA)
DNA replication proteins [BR:
strl03032
]
Prokaryotic type
DNA Topoisomerases
HEP84_28725 (topA)
DNA repair and recombination proteins [BR:
strl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HEP84_28725 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QIY72535
UniProt:
A0A6H1LDW9
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All DBs
Position
6343736..6346549
Genome browser
AA seq
937 aa
AA seq
DB search
MSPTSDTAHGGRRLVIVESPAKAKTIKGYLGPGYVVEASVGHIRDLPNGAAEVPEEYTGE
VRRLGVDVEHDFQPIYVVNADKKAQVKKLKDLLRDSDELYLATDEDREGEAIAWHLQEVL
KPKVPVKRMVFHEITKAAIQAAVANPRELNQKLVDAQETRRILDRLYGYEVSPVLWKKVM
PRLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGTFLTGRAGDASDPSNLVARLTTVD
GKRVAQGRDFDSLGQLKSANTLHLDETNARALAAALENTNFAVRSVESKPYRRSPYAPFR
TTTLQQEASRKLGFGAKATMQVAQKLYENGFITYMRTDSTTLSETAISAARAQVTQLYGA
DYLPAQPRTYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFKLYELIWKRTVASQMK
DAVGNSVTVKIAGTASGGRDAEFSASGKTITFHGFLKAYVEGADDPNAELDDRERRLPQV
NEGDPLSAEEITVDGHATKPPARYTEASLVKELEEREIGRPSTYASIIGTILDRGYVFKK
GTALVPSFLSFAVVNLLEKHFGRLVDYDFTAKMEDDLDRIARGEAQAVPWLKRFYFGEGD
AAGAAEAGNGDGDHLGGLKELVTDLGAIDAREVSSFPVGEGIVLRVGRYGPYIERGEKDS
ENHQRADVPEDLAPDELSIELAEELLAKPSGDFELGTDPESGHQIIARDGRYGPYVTEVL
PEGTPKTGKNAVKPRTASLFKSMSLDTVTLGDALKLMSLPRVVGKDAEGVEITAQNGRYG
PYLKKGTDSRSLQSEDQLFTITLEEALEIYSQPKQRGRAAAKPPLKELGEDPVSGKPVVV
KDGRFGPYVTDGETNATLRSADSVEEITPERGYELLAEKRAKAPAKKTAKKAAAKKTATK
KAPAKKTAAKKTTTSKTAAKKAPAKKTVAKKTAASEN
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgacaccgcacacggcggccgccgactcgtcatcgtcgagtcgcct
gccaaggcgaagacgatcaagggctatctcggccccggctatgtcgtcgaagcgagcgtc
gggcacatccgcgacctccccaacggtgccgcggaggtgcccgaggagtacaccggcgag
gtgcgccgcctcggcgtggacgtcgagcacgacttccagcccatctatgtggtcaacgcc
gacaagaaggcccaggtcaagaagctcaaggacctgctgcgcgactccgacgagctctac
ctcgccaccgatgaggaccgcgagggcgaggccatcgcgtggcacctccaggaagtgctc
aagcccaaggtcccggtcaagcggatggtcttccacgagatcaccaaggccgcgatccag
gccgccgtcgccaacccgcgcgagctcaaccagaagctcgtcgacgcccaggagacccgc
cgcatcctcgaccgcctctatggctacgaggtctcgccggtcctgtggaagaaggtcatg
ccgcggctgtcggcgggccgtgtgcagtccgtagcgacccggctcgtcgtcgagcgggag
cgcgagcgcatcgccttccgctccgccgagtactgggacctgaccggcaccttcctcacc
ggccgcgccggtgacgccagcgacccgtccaacctggtcgcccgcctcaccacggtcgac
ggcaagcgcgtcgcccagggccgcgacttcgactcgctcggtcagctgaagagcgcgaac
acgctgcacttggacgagaccaacgcccgtgcgctggccgccgccctggagaacacgaac
ttcgcggtccgctcggtcgagtccaagccgtaccgccgctcgccgtacgcgccgttccgc
acgacgaccctccagcaggaggcctcgcgcaagctgggcttcggcgcgaaggccaccatg
caggtggcccagaagctgtacgagaacggcttcatcacgtacatgcgtacggactccacg
accctctcggaaacggcgatctccgccgcccgcgcccaggtcacgcagctctacggtgcc
gactacctgccggcccagccgcggacgtacgccgggaaggtcaagaacgcgcaggaggcg
cacgaggcgatccgtccctcgggtgatcgtttccgcaccccggccgagacgggcctgacc
ggcgaccagttcaagttgtacgagctgatctggaagcggaccgtcgcctcccagatgaag
gacgcggtcggcaactccgtcaccgtgaagatcgcgggcacggcctccggcggccgcgac
gccgagttcagcgcgtccggcaagacgatcaccttccacggcttcctgaaggcgtacgtc
gaaggcgcggacgacccgaacgccgagctcgacgaccgtgagcgtcgtctcccgcaggtc
aacgagggcgacccgctgtccgccgaggagatcacggtcgacgggcacgccaccaagccc
ccggcccgctacaccgaggcgtcgctggtcaaggagctcgaagagcgcgagatcggccgc
ccgtcgacgtacgcgtcgatcatcggcacgatcctcgaccgcggatacgtgttcaagaag
ggcacggcactcgtgccgtccttcctgtccttcgccgtggtcaacctcctggagaagcac
ttcgggcggctcgtcgactacgacttcacggccaagatggaggacgacctcgaccgcatc
gcgcggggcgaggcgcaggccgtgccgtggctcaagcggttctacttcggcgagggcgat
gccgcgggcgcagccgaggccggcaacggcgacggggaccacctgggcggcctcaaggag
ctcgtcaccgacctgggcgccatcgacgcccgcgaggtgtcgtccttcccggtcggcgag
ggcatcgtgctgcgtgtgggccgctacggcccgtacatcgagcgcggcgagaaggactcc
gagaaccaccagcgcgcggacgtgcccgaggacctggccccggacgagctgagcatcgag
ctcgcggaggagctgctcgccaagccgagcggagacttcgagctcggtacggatccggag
tcgggccaccagatcatcgccagggacggccgctacggcccgtacgtcaccgaggtgctc
cccgagggcaccccgaagacgggcaagaacgccgtcaagccgcgtaccgcctcactcttc
aagtcgatgtcgctggacacggtgacgctcggcgacgccctcaaactgatgtccctgccg
cgcgtcgtcggcaaggatgccgagggcgtggagatcaccgcgcagaacgggcgctacggg
ccgtacctgaagaagggcacggactcgcgctccctgcagtccgaggaccagctcttcacc
atcaccctcgaagaggcgctggagatctactcccagcccaagcagcgcgggcgcgcggcc
gccaagccgccgctcaaggagctgggcgaggacccggtcagcgggaagcccgtcgtggtc
aaggacggccgtttcgggccgtacgtgaccgacggcgagaccaacgcgaccctgcgctcc
gccgacagcgtcgaggagatcactccggagcgcggctacgagctgctggcggagaagcgc
gccaaggctcccgccaagaagaccgcgaagaaggccgccgccaagaagacggcgaccaag
aaggcccccgccaagaagaccgccgcgaagaagacgacgacttcgaagacggctgccaag
aaggctccggccaagaagaccgtcgccaagaagacggcggcttcggagaactga
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