Streptomyces sp. RLB1-33: HEP84_30915
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Entry
HEP84_30915 CDS
T10398
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
strl Streptomyces sp. RLB1-33
Pathway
strl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
strl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HEP84_30915 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strl03019
]
HEP84_30915 (groL)
03110 Chaperones and folding catalysts [BR:
strl03110
]
HEP84_30915 (groL)
03029 Mitochondrial biogenesis [BR:
strl03029
]
HEP84_30915 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
strl04147
]
HEP84_30915 (groL)
Enzymes [BR:
strl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HEP84_30915 (groL)
Messenger RNA biogenesis [BR:
strl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HEP84_30915 (groL)
Chaperones and folding catalysts [BR:
strl03110
]
Heat shock proteins
HSP60 / Chaperonin
HEP84_30915 (groL)
Mitochondrial biogenesis [BR:
strl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HEP84_30915 (groL)
Exosome [BR:
strl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HEP84_30915 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HEP84_30915 (groL)
Exosomal proteins of breast cancer cells
HEP84_30915 (groL)
Exosomal proteins of colorectal cancer cells
HEP84_30915 (groL)
Exosomal proteins of bladder cancer cells
HEP84_30915 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QIY72904
LinkDB
All DBs
Position
6809416..6811038
Genome browser
AA seq
540 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
LDDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLKNVAAGASPALLKKGID
AAVKAVSDELLATARPIEEKSDIAAVAALSAQDPQVGELIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYMVSDQERMEAVLDDPYILIHQGKISSIQDLLPLLEKVIQ
SNASRPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLGDIATLTGGQV
IAEEVGLKLDQVGLDVLGSARRVTVTKDDTTIVDGGGNSEEVLGRVNQIKAEIENTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HAVKILEGNLGKTGDEATGVAVVRKAAVEPLRWIAENAGLEGYVITSKVAELDKGQGFNA
ATGEYGDLVKSGVIDPVKVTRSALENAASIASLLLTTETLVVEKPAEEEADAGHGHGHSH
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgccctcgagcgcggcgtcaac
aagcttgccgacacggtcaaggtgacgatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggcgcacccaccatcaccaacgacggtgtcaccatcgcccgcgaggtcgag
ctcgacgacccgtacgagaacctcggcgcccagctggtgaaggaggtggcgaccaagacc
aacgacatcgcgggtgacggtacgaccaccgccaccgtgctggcccaggcgctcgtccgc
gagggcctgaagaacgtcgccgcgggtgcctccccggcgctgctcaagaagggcatcgac
gcggccgtcaaggcggtctcggacgagctcctcgccaccgcgcgcccgatcgaggagaag
tcggacatcgccgccgtcgccgcgctgtccgcccaggacccgcaggtcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggcctggagctggacttcaccgagggcatggccttcgacaagggctacctgtcgccg
tacatggtgtccgaccaggagcgtatggaggccgtcctcgacgacccgtacatcctcatc
caccagggcaagatcagctccatccaggacctgctgccgctgctggagaaggtcatccag
tccaacgcctcccggccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcg
accctggtcgtgaacaagatccgcggcacgttcaacgccgtcgccgtgaaggcccccggc
ttcggtgaccgccgcaaggccatgctcggcgacatcgccaccctcaccggtggtcaggtc
atcgccgaggaggtcggcctcaagctcgaccaggtcggtctggacgtgctgggcagcgcc
cgccgtgtgaccgtcaccaaggacgacaccaccatcgtcgacggtggcggcaactccgag
gaggtcctcggccgggtcaaccagatcaaggccgagatcgagaacaccgactccgactgg
gaccgcgagaagctccaggagcgcctcgcgaagctggccggcggcgtgtgcgtgatcaag
gtcggcgccgccaccgaggtcgagctcaaggagaagaagcaccgtctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgcgctcgtc
cacgccgtgaagatcctcgagggcaacctcggcaagaccggcgacgaggccacgggtgtc
gcggtcgtccgcaaggccgccgtcgagccgctgcgctggatcgcggagaacgccggcctt
gagggttacgtcatcacctccaaggtcgccgagctcgacaagggccagggcttcaacgcc
gccaccggcgagtacggcgacctggtcaagtccggtgtcatcgacccggtcaaggtcacc
cgctccgccctggagaacgccgcctccatcgcctccctgctcctcacgaccgagaccctg
gtcgtcgagaagccggcggaggaggaggccgacgccggtcacggccacgggcactcccac
tga
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