Streptomyces sp. RLB1-33: HEP84_33975
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Entry
HEP84_33975 CDS
T10398
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
strl Streptomyces sp. RLB1-33
Pathway
strl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
strl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HEP84_33975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strl03400
]
HEP84_33975
DNA repair and recombination proteins [BR:
strl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HEP84_33975
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
HC2
YebG
Motif
Other DBs
NCBI-ProteinID:
QIY73409
LinkDB
All DBs
Position
7485112..7486215
Genome browser
AA seq
367 aa
AA seq
DB search
MPHVRSIWNGAISFGLVSIPIKVVNATESHSISFRQVHLDDGGRIRYRKFCELEDREVTT
GEIGKAYEDADGTLITITDEELAALPIPTARTIEIVAFVPAERIDPLQMDTAYYLAANGV
PATKPYVLLREALKRSQKVAVAKFALRGRERLGMLRVVDDVIAMHGLLWPDEIRSTQEVA
PDATVTVRDKELDLADALMDTLGEVELTELHDDYREAVEELVAAKASGELQATPPAGERA
GGKVLDLMAALEKSVRAAKVSRGEETGEETGARTGGSAEVTALPSRRSARTAPKEVGGKK
STSTAKKTAPKKTAAKSTAKSTGQAAGKTAATKSTAKKTAAKKATAKKATGKKTAAKKAT
PRGRASA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcacgtgcgatccatctggaacggcgccatctccttcggcctggtcagcatcccg
atcaaggtcgtgaacgcgacggagagccactcgatctccttccgccaggtccacctggac
gacggcggccgcatccggtaccgcaagttctgcgaactggaggaccgcgaggtcaccacc
ggtgagatcggcaaggcgtacgaggacgcggacggcacgctgatcacgatcacggacgag
gagctggccgcgctgccgatccccaccgcgaggacgatcgagatcgtggccttcgtaccg
gccgagcggatcgacccgctccagatggacacggcgtactacctggccgcgaacggcgtc
cccgccaccaagccgtacgtcctgctgcgcgaggcgctcaagcgcagccagaaggtcgcc
gtcgcgaagttcgcgctgcgcgggcgggagcggctcggcatgctgcgtgtggtggacgac
gtgatcgccatgcacgggctgctgtggccggacgagatccggtccacccaggaggtcgcc
ccggacgcgaccgtgaccgtacgggacaaggaactcgacctggccgacgccctcatggac
accctcggtgaggtcgagctcaccgaactgcacgacgactaccgcgaggccgtcgaggaa
ctcgtcgccgccaaggcctccggtgaactccaggccacgccccccgccggggagcgggcc
ggcggcaaggtgctcgacctgatggccgccctggagaagagcgtgcgcgcggccaaggtg
tcccggggtgaggagacgggcgaggagaccggggcgcggaccggcggatccgcagaggtc
accgcgctgccctcccgcaggtcggcccgtacggcgcccaaggaggtcggcgggaagaag
tccacgtcgaccgcgaagaagacggcgccgaagaagacggccgcgaagtccacggcgaag
tcgacgggccaggcggccggcaagacggcggccaccaagtccaccgcgaagaagacggcg
gccaagaaggcgaccgccaagaaggcgacggggaagaagacggccgcgaagaaggccacc
ccgcgggggcgcgcctcggcctga
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