Streptomyces sp. RLB1-33: HEP84_35535
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Entry
HEP84_35535 CDS
T10398
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
strl Streptomyces sp. RLB1-33
Pathway
strl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
strl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HEP84_35535 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strl03019
]
HEP84_35535 (rnc)
03009 Ribosome biogenesis [BR:
strl03009
]
HEP84_35535 (rnc)
03036 Chromosome and associated proteins [BR:
strl03036
]
HEP84_35535 (rnc)
Enzymes [BR:
strl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
HEP84_35535 (rnc)
Messenger RNA biogenesis [BR:
strl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HEP84_35535 (rnc)
Ribosome biogenesis [BR:
strl03009
]
Eukaryotic type
90S particles
RNase
HEP84_35535 (rnc)
Prokaryotic type
rRNA processing factors
HEP84_35535 (rnc)
Chromosome and associated proteins [BR:
strl03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
HEP84_35535 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QIY73674
LinkDB
All DBs
Position
7840660..7841517
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AA seq
285 aa
AA seq
DB search
MSDAKADSNAKKKADNTASSHTLLEGRLGYKLESALLVRALTHRSYAYENGGLPTNERLE
FLGDSVLGLVVTDTLYRTHPDLPEGQLAKLRAAVVNSRALAEVGRGLELGSFIRLGRGEE
GTGGRDKASILADTLEAVIGAVYLDQGLDAAGELVHRLFDPLIEKSSNLGAGLDWKTSLQ
ELTATEGLGVPEYLVSETGPDHEKTFTAAARVGGVSYGTGTGRSKKEAEQQAAESAWRAI
RAAADERAKSAQAAEEAAQAAEQAAKVAEGTADTPSAPTSDSATA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgccaaggcggactcaaacgccaagaaaaaggcggacaacacagcctcgtcc
cacacgcttctggaagggcggctcgggtacaagctcgagtccgcccttctggtgcgtgcg
ctgacccaccgttcctacgcgtacgagaacggcggtctgccgaccaacgagcgtctggag
ttcctcggggactccgtgctcggcctcgtggtcacggacacgctgtatcgcacccacccc
gacctgcccgaaggccagctggccaagttgcgggccgcggtggtcaactcgcgtgcgctg
gcggaagtgggccgcggcctcgaactcggctccttcatccggctcggccggggcgaggaa
ggcacgggaggccgggacaaggcatccatcctcgccgacacccttgaagcggtgatcggc
gcggtctatctcgaccagggtctggacgcggcgggcgaactcgtccaccggctcttcgac
ccactgatcgagaagtcctcgaatctgggcgcaggcctggactggaagaccagtctccag
gaactcaccgcgaccgaggggctcggcgttcccgagtacctggtctcggagaccggcccg
gaccacgagaagacctttactgctgccgcccgcgtcggaggcgtctcgtacggcaccggc
accggccgcagcaagaaggaagcggagcagcaggccgcggagtccgcgtggcgtgccatc
cgcgccgccgcggacgaacgagcgaagtcggcccaggccgccgaggaagcggcccaggcc
gccgagcaggctgccaaggtcgccgaggggaccgccgacaccccctcggctccgacgagc
gactcggccacggcctga
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