Streptomyces sp. RLB1-33: HEP84_36055
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Entry
HEP84_36055 CDS
T10398
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
strl Streptomyces sp. RLB1-33
Pathway
strl02020
Two-component system
strl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
strl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HEP84_36055 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HEP84_36055 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strl03021
]
HEP84_36055 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
strl02035
]
HEP84_36055 (whiG)
Transcription machinery [BR:
strl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HEP84_36055 (whiG)
Bacterial motility proteins [BR:
strl02035
]
Flagellar system
Flagellar assembly proteins
Stator
HEP84_36055 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_31
UPF0122
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QIY73754
LinkDB
All DBs
Position
7953443..7954285
Genome browser
AA seq
280 aa
AA seq
DB search
MPQHTSGSDRAAIPPAARDGGSVRPPAPSTLDELWRSYKATGDERLREQLILHYSPLVKY
VAGRVSVGLPANVEQADFVSSGVFGLIDAIEKFDIEREIKFETYAITRIRGAMIDELRAL
DWIPRSVRQKARNVERAYATLEARLRRTPSEGEVASEMGIGVEELHAVFSQLSLANVVAL
EELLHVGGEGGGRLSLMDTLEDTAADNPVEVAEDRELRRFLARAINTLPEREKTVVTLYY
YEGLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLASFGR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggtccgatcgggcggcgatccccccagccgcccgcgacggc
ggtagcgtgcgcccgcccgctccctcgacgctcgacgagctgtggcggtcgtacaaggcg
acgggggacgagcggctgcgcgagcagttgatcctgcactactcgccgctggtgaagtac
gtcgcggggcgggtgagcgtgggtctgccggccaatgtggagcaggccgacttcgtctcg
tcgggggtgttcgggctgatcgacgcgatcgagaagttcgacatcgagcgggagatcaag
ttcgagacgtacgcgatcacgcggatccggggcgcgatgatcgacgagttgcgggcgctg
gactggatcccccggtccgtgcggcagaaggcacgcaatgtggagcgggcgtacgcgacg
ctcgaggcgcggctgcggcggacgccgtcggagggagaggtggcctccgagatggggatc
ggggtggaggaactccacgcggtcttcagccagttgtcgctggccaacgtggtggcgctg
gaggagctgctgcacgtcggcggtgagggcggtggccggctgagtctgatggacacgctg
gaggacaccgcggcggacaatccggtggaggtcgccgaggaccgggagctgcggaggttt
ctggcacgggcgatcaacacgctgccggagcgggagaagaccgtggtcacgctctactac
tacgagggtctgacgctcgcggagatcgggaacgtgctgggagtcacggagagccgggtg
agccagatccacaccaagtcggtgctgcagttgcgcgccaagctggcgagtttcgggcgc
tga
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integrated database retrieval system
