Streptomyces sp. RLB1-33: HEP84_38860
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Entry
HEP84_38860 CDS
T10398
Name
(GenBank) rhamnogalacturonan lyase B N-terminal domain-containing protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
strl Streptomyces sp. RLB1-33
Brite
KEGG Orthology (KO) [BR:
strl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
HEP84_38860
Enzymes [BR:
strl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
HEP84_38860
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Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
DUF4278
OST_IS
DUF4340
DUF4397
Motif
Other DBs
NCBI-ProteinID:
QIY74223
UniProt:
A0A6H1LCN4
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All DBs
Position
complement(8651874..8653550)
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AA seq
558 aa
AA seq
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MSGSTDRSLGRRTFVLGTTAAAVSATALTRTAAAASFGYTDDGSNYVIDTGANLVFKVSK
TNGDLTSLVYRGTEYQGYGGKNSHVESGLGTSTVTIAQSGSTILVSVAYGTLKHYYAARS
GENNVYLWTNKADTSVSATRYIVRVKAGLFLNDEPDSYTYAPTTIESADVFAKSDGQTRS
KHYSKLRVIDYTYIGWTTGSVGLWIVRSNHERASGGPFYRSLLRHQSADGGGLYEILYYG
ENQTESERFGLQGPYVIAFTDGGAPSSSLYAGNLTTSWADSLGISGYTAASGRGRVAGVG
ISGRDTAYAYTVGLANSAAQYWGSARASDGYFSIAGALPGSYTLTVFKGELAVYTTSVTV
TAGGTTTLNSIAIPSSNDPSNASAIWRIGNWDGTPGGFKNADLMTYAHPSDVRAASWTGN
VVVGSGSGSETSAFPCYLWKDVNSGIIVYFKLTAAQATAAHTLRIGVTTAYANGRPQIVV
NDTWTSAVPSPPTQPSTRSLTVGSYRGNNYTFSYSVPASAWLTDTSAYNTLKIYVASGSG
STSFLSAGTSVDAVDLLT
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtccggatccaccgacagatccctcggacgccgcaccttcgtcctcggcacgaccgcg
gcggccgtgagcgcgacggccctcacccggacggccgccgccgcgagcttcggctacacg
gacgacggctcgaactacgtcatcgacaccggcgcgaacctcgtcttcaaggtcagcaag
accaacggcgacctgacctcgctcgtctaccgcggcaccgagtaccagggctacggcggc
aagaactcgcacgtcgagtccggcctgggcacctccaccgtgaccatcgctcagtccggt
tcgacgatcctcgtctccgtcgcgtacggcacgctcaagcactactacgcggcccgcagc
ggcgagaacaacgtctatctgtggaccaacaaggccgacacgtcggtcagcgcgacccgt
tacatcgtgcgcgtcaaggcaggcctgttcctcaacgacgagccggactcctacacgtac
gcgcccaccaccatcgagtccgcggacgtcttcgcgaagtccgacggccagacccgctcg
aagcactactcgaagctccgcgtcatcgactacacctacatcggctggaccaccggaagc
gtcggcctgtggatcgtgcgcagcaaccacgaaagggcctccggcggcccgttctaccgc
tccctgctgcggcaccagagcgcggacggcggcgggctgtacgagatcctgtactacggc
gagaaccagaccgagtcggagcgcttcggcctccagggtccgtacgtcatcgccttcacg
gacggcggcgcgccctcctcctcgctgtacgcggggaatctcaccacctcctgggcggac
tcgctcggcatctccgggtacacggccgcgagcggccggggccgggtcgcgggcgtgggc
atctcggggcgcgacacggcatacgcgtacacggtcgggctcgccaactcggccgcacag
tactggggttcggcgcgggcctcggacggctacttctcgatcgcgggcgcgctgccgggg
tcgtacaccctcacggtcttcaagggcgaactcgccgtgtacaccacgtcggtgacggtc
acggcgggcgggaccacgacgctgaacagcatcgcgatcccctcctccaacgacccgtcc
aacgcgagcgcgatctggcggatcggcaactgggacggcacgccgggcgggttcaagaac
gcggacctgatgacgtacgcgcatccgtcggacgtacgggccgcgtcctggaccggcaac
gtcgtcgtcggcagcggcagcggcagcgagacctcggcgttcccctgctacctgtggaag
gacgtcaacagcggcatcatcgtgtacttcaagctgaccgccgcccaggccaccgccgcg
cacaccctgcgcatcggcgtgaccacggcctacgcgaacggccgcccgcagatcgtggtc
aacgacacctggacctcggccgtcccctcgccacccacccagccgagcacccggtcgctg
accgtgggctcgtaccggggcaacaactacacgttcagctacagcgttcccgcgtccgcc
tggctgacggacacgagtgcgtacaacacgctgaagatctacgtggcgagcggttcgggg
tcgacgtccttcctcagcgccggcacctccgtcgacgccgtcgacctactgacctga
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