Streptomyces sp. RLB1-33: HEP84_40795
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Entry
HEP84_40795 CDS
T10398
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
strl Streptomyces sp. RLB1-33
Pathway
strl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
strl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HEP84_40795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
strl03000
]
HEP84_40795
03400 DNA repair and recombination proteins [BR:
strl03400
]
HEP84_40795
Enzymes [BR:
strl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
HEP84_40795
Transcription factors [BR:
strl03000
]
Prokaryotic type
Helix-turn-helix
AraC family
HEP84_40795
DNA repair and recombination proteins [BR:
strl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HEP84_40795
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
QIY77372
LinkDB
All DBs
Position
9095730..9097211
Genome browser
AA seq
493 aa
AA seq
DB search
MRNGMHTDMERCVRAVQSKDARFDGWFFTAVLTTRIYCRPSCPVVPPKPENMTFYPSAAA
CQQAGFRACKRCRPDTSPGSPEWNQRADLVARAMRLIGDGVVDREGIPGLAGRLGYSIRQ
VERQLLAELGAGPLALARAQRAQTARLLIETTTLPMAEIAFAAGFSSIRTFNDTVREVFA
LAPSELRDRVPKKRAPATPGVLSLRLPFRAPLNPDNLFGHLAATAVPGVEEWRDGAYRRT
LRLPYGHGIVGLTPHVDHIACRLTLSDLRDLPVAISRCRRMLDLDADPVAVDDQLRTDPV
LAPLVAKAPGRRVPRTVDEAEFAVRAVLGQQVSTAAARTHAARLVTAHGEPVEDPEGGLT
HLFPSPRALAALDPSTLAMPSTRRTTFTTLVHQLADGTLRLGVESDWAEARARLLALPGF
GPWTVDVIGMRALGDPDAFLPTDLGIRRAAQELGLPSTPAALTARAAAWRPWRAYAVQYL
WATDSHPINFLPV
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcggaacgggatgcacaccgacatggagcgctgtgtgcgcgctgtccagtcgaaggac
gcgcgcttcgacggatggttcttcacagcggtcctgaccacgcggatctactgccggccg
agctgcccggtggtgccgccgaaacccgagaacatgacgttctacccgagtgcggcggcc
tgccagcaggccgggttccgggcctgcaagcgctgccgtccggacaccagccccggctcg
cccgagtggaaccagcgagccgacctcgtcgcgcgtgcgatgcgcctgatcggcgacggg
gtcgtggaccgcgaggggatcccgggcctggcgggccggctcggctacagcatccgccag
gtcgagcggcagctgctggccgagttgggcgcgggaccgctcgcgctcgcccgggcccag
cgcgcccagaccgcccggctgctcatcgagaccaccacgctcccgatggcggagatcgcc
ttcgcggccgggttctcctccatccgcaccttcaacgacaccgtgcgcgaggtcttcgcc
ctcgccccgagcgagctgcgcgaccgagtgccgaagaaacgcgccccggccacaccgggc
gtcctgagcctgcggctccccttccgcgccccgctcaaccccgacaacctcttcggtcac
ctcgcggcgaccgccgtacccggtgtcgaggagtggcgcgacggcgcctaccggcgcacc
ctgcgcctgccctacggccacgggatcgtcgggctcaccccgcacgtcgaccacatcgcc
tgccgcctcaccctcagtgacctgcgcgacctgcccgtcgcgatcagccgctgccgccgc
atgctcgacctggacgccgacccggtggccgtcgacgaccagctgcggacggatcccgtg
ctggcgcccctggtggcgaaggccccgggccgccgggtgccgcgcacggtcgacgaggcc
gagttcgccgtacgggccgtcctgggccagcaggtctccaccgccgccgcccgtacccac
gcggcccgcctggtcaccgcgcacggcgaacccgtcgaggaccccgagggcggcctcacc
cacctctttccctctcctcgggcgctcgcggccctggacccgtccacgctcgcgatgccg
agcacccgccgcaccaccttcaccaccctcgtacaccaactcgctgacgggacccttcgc
ttgggagtggagagcgactgggccgaggcccgcgcccgcctcctcgccctccccggcttc
ggtccctggacggtcgacgtcatcggcatgcgcgcgctcggcgaccccgacgccttcctc
cccaccgacctcggaatccggcgcgcggcccaggagctgggcctgccgtcgaccccagcc
gccctcacggcgcgcgcggcggcgtggcgcccgtggcgggcgtacgcggtccagtacctg
tgggcgacggacagccacccgatcaacttcctccccgtataa
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