Streptomyces sp. RLB1-33: HEP84_41060
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Entry
HEP84_41060 CDS
T10398
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
strl Streptomyces sp. RLB1-33
Brite
KEGG Orthology (KO) [BR:
strl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strl03021
]
HEP84_41060
Transcription machinery [BR:
strl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HEP84_41060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
DUF7343
HTH_Crp_2
HTH_23
GerE
MarR_2
DUF4423
HTH_24
HTH_28
HTH_3
DUF7342
MarR
Peptidase_M75
KORA
UPF0122
Motif
Other DBs
NCBI-ProteinID:
QIY74549
LinkDB
All DBs
Position
9158264..9159058
Genome browser
AA seq
264 aa
AA seq
DB search
MRNQVSAKRHPHDDAPDTMEAFRRLASLPPGRQRDTLREQIVEAWLPMADRLAGRFRNRG
ESLEDLRQVAALGLVKAVDRYDPELGNAFESYAVPTVTGEIKRHFRDHMWTLHVPRRVQD
LRNRVRFAVQELSGTISGRRPTVAEIAEHARMSEEDVRAGLEALESFTALSLDAEVPGSD
DGYSLSDALGSADPALDVVIDREAVKPRLQALPERERTILYMRFFGDMTQSRIADELGIS
QMHVSRLISRCCHRLRDQVMRDAA
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaccaagtgagcgcgaaacgccatccgcacgacgacgcccctgacaccatggag
gcattccgcaggctcgcctcgctccctccgggccggcagcgcgacacgctccgcgagcag
atcgtcgaggcctggctgccgatggcggaccggctcgcgggccggttccgcaaccgcggt
gagagcctggaggacctgcgccaggtcgcggcgctcggtctggtcaaggcggtggaccgg
tacgaccccgagctcggcaacgccttcgagagctacgccgtgccgaccgtcaccggcgag
atcaaacggcacttccgcgaccacatgtggaccctgcacgtgccgcgccgcgtccaggac
ctgcgcaaccgtgtgcggttcgccgtccaggaactctcggggaccatctcgggccgcagg
cccaccgtcgccgagatcgccgagcacgcccggatgagcgaggaggacgtccgggccggc
ctggaggctctggagagcttcacggcgctctccctggacgccgaggtccccggcagcgac
gacggctactcgctcagcgacgccctcggctcggccgaccccgcgctcgacgtcgtcatc
gaccgcgaggccgtcaagccccggttgcaggccctgcccgagcgtgaacgcaccatcctc
tacatgcggttcttcggcgacatgacgcagagccggatcgccgacgaactcgggatctcg
cagatgcacgtgtcgcggctgatcagccggtgctgccaccggctgcgcgaccaggtgatg
cgcgacgccgcgtag
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