Streptomyces sp. RLB1-33: HEP84_44755
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Entry
HEP84_44755 CDS
T10398
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
strl Streptomyces sp. RLB1-33
Pathway
strl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
strl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HEP84_44755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strl03400
]
HEP84_44755
Enzymes [BR:
strl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HEP84_44755
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HEP84_44755
DNA repair and recombination proteins [BR:
strl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HEP84_44755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Zn_ribbon_RRN7
Ribosomal_S13
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QIY75112
UniProt:
A0A6H1LWA7
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All DBs
Position
9984695..9985555
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AA seq
286 aa
AA seq
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MPELPEVEALKDFLADHLVGREVVRVLPVAISVLKTYDPPVTAFEGREVTAVRRRGKFLD
IEADGLHLVTHLARAGWLHWKDTLPDGPPRPGKGPLALRVALETGEGFDLTEAGTQKRLA
VYVVRDPAEVPGVARLGPDPLAADFDEARFARLLAGERRQLKGALRDQSLIAGVGNAYSD
EILHAAKMSPFKLAASLTPEETTRLYEALRSTLTEAVERSHGLAAGRLKAEKKSGLRVHG
RTGEPCPVCGDIIREVFFSDSSLQYCPTCQTGGRPLADRRLSRLLK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgccagaggtcgaagcgctcaaggacttcctggccgaccatcttgtcggc
cgcgaggtcgtgcgcgtgctgcccgtcgccatcagtgtcctgaagacctacgacccgccc
gtcaccgccttcgagggccgcgaggtgaccgcagtgcgccggcgcggcaagttcctcgac
atcgaggccgacggactgcacctcgtgacccacctggcccgcgcgggctggctgcactgg
aaggacacgctgcccgacggcccgccccgtcccggcaagggcccgctcgcgctgcgtgtc
gccctggagaccggcgagggcttcgacctcaccgaggccggcacacagaagagactcgcg
gtgtacgtcgtccgggacccggcggaggtccccggcgtggcccgcctcggccccgacccg
ctcgccgccgacttcgacgaggcacggttcgcccggctgctcgcgggtgagcgccgccaa
ctcaagggcgcactgcgggaccagagcctgatcgccggcgtgggaaacgcgtacagcgac
gagatcctgcacgccgccaagatgtctcccttcaagctggccgcctcactgacccccgag
gagacgacccgtctctacgaggcgctgcggtccacgctcaccgaggccgtggagcgctcc
cacggtctggccgcggggcgcctcaaggcggagaagaagagcgggctgcgcgtgcacggc
agaacgggtgagccgtgcccggtgtgcggcgacatcatccgcgaggtcttcttcagcgat
tcctcgctgcagtactgcccgacctgtcagacgggaggcaggccactcgcggaccgccgg
ttgtcccggctgctcaaatag
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