Streptomyces sp. RLB1-33: HEP84_46810
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Entry
HEP84_46810 CDS
T10398
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
strl Streptomyces sp. RLB1-33
Pathway
strl00040
Pentose and glucuronate interconversions
strl01100
Metabolic pathways
strl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
strl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HEP84_46810
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HEP84_46810
Enzymes [BR:
strl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
HEP84_46810
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QIY75449
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Position
10415121..10416101
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AA seq
326 aa
AA seq
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MRTRPPRTRTRRLALAMATAAALAVTTALVLPSSASAADTSPVGFGAGTTGGGGATAATV
STLDAFKAAVTGDTAKVVRVNGLITLSGQVDIGSNTTVLGVGSASGFTGGGLRLKKVTNV
VVRNLNISKPLKPADGITVQASTKVWIDHNSFSSDRDHGKDYYDGLLDINHGADYVTVSW
NTFKDHYKGSLVGHSDNNASEDAGHLRVTYHHNWFNNVNSRIPSLRFGTGHFYDNYVVGA
DTAVHSRMGAQMLVENNVFRTTTVAVTTNRDSDVDGYANLRGNDLGGAATEISQVGTFTT
PPYSYTAEPASSVVASVTSGAGAGKL
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactcgccccccacgaacacgcacccgcagactggccctggccatggccaccgcg
gccgcgctggccgtcaccaccgctctcgtcctcccgtcgtccgcctcggcggccgacacc
tcgccggtcggcttcggtgccgggaccaccggcggcgggggagccaccgccgccaccgtc
tcgaccctcgacgccttcaaggcggccgtcacgggcgacaccgccaaggtggtgcgcgtg
aacggcctgatcacgctcagtggacaggtcgacatcggctccaacaccaccgttctcggc
gtgggttcggcgtccggtttcaccggcggcggactgcggctgaagaaggtgaccaacgtg
gtcgtccgcaacctgaacatcagcaagccgctcaagccggccgacggcatcaccgtgcag
gcgtcgacgaaggtgtggatcgaccacaactccttctcgtccgaccgggaccacggcaag
gactactacgacggtctgctcgacatcaatcacggcgccgactacgtcaccgtgtcctgg
aacaccttcaaggaccactacaagggctcgctcgtcggccacagcgacaacaacgcgagc
gaggacgccgggcatctgcgggtgacgtaccaccacaactggttcaacaacgtcaactct
cgcatccccagcctgcgcttcggcaccggccacttctacgacaactacgtcgtcggggcc
gacaccgccgtgcactcccgcatgggcgcccagatgctcgtcgagaacaacgtcttccgt
accacgacggtcgccgtcacgaccaaccgcgacagcgacgtcgacggatacgccaacctg
cgcggcaacgacctcgggggagccgccaccgagatctcgcaggtgggcaccttcaccacc
ccgccctacagctacaccgccgagcctgcctcgagtgtcgtcgcctcggtgacgtccggc
gcgggcgccggaaagctctga
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