Streptomyces sp. RLB1-33: HEP84_50155
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Entry
HEP84_50155 CDS
T10398
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
strl Streptomyces sp. RLB1-33
Pathway
strl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
strl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HEP84_50155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strl03021
]
HEP84_50155
03400 DNA repair and recombination proteins [BR:
strl03400
]
HEP84_50155
Enzymes [BR:
strl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HEP84_50155
Transcription machinery [BR:
strl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HEP84_50155
DNA repair and recombination proteins [BR:
strl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HEP84_50155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QIY75926
UniProt:
A0A6H1L9P9
LinkDB
All DBs
Position
complement(11142759..11143775)
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AA seq
338 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLVLPIEELELTVRSYNCLKREGVHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAALGADDDADAGFVETEQY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgctgattgctcagcgtccgtccctgaccgaagaggtcgtcgacgagttccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactccctgcgccgc
acgctcctctcctcgatcccgggtgcggcggtcacgtccatccgcatcgacggcgttctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctgatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggcccgggtctggtcaccgccgccgacatcgcgcccccggccggtgtcgaggtgcacaac
cccgacctcgtcctcgccacgctcaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgttcagaacaagcaggtcggtcaggagatcggc
cgtatcccggtcgactcgatctactcgccggtgctgaaggtcacgtacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcgtccccgtgacgccatggcgtcggccggtaagaccctggtcgagctgttcggt
ctggcccgcgagctcaacatcgacgccgagggcatcgacatgggcccgtcccccacggac
gccgccctcgccgccgacctggtactgccgatcgaggagctcgagctcaccgtccgatcg
tacaactgcctcaagcgcgagggcgtccactccgtgggtgagctcgtcgcccgctccgag
gccgacctcctggacatccgcaacttcggtgcgaagtccatcgacgaggtcaaggcgaag
ctggccggcatgggcctggccctcaaggacagcccgcccggattcgacccgaccgccgcc
gcactcggtgcggacgacgacgcggacgcgggtttcgtggagaccgagcaatactga
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