Streptomyces sp. RLB1-33: HEP84_53230
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Entry
HEP84_53230 CDS
T10398
Symbol
tnpB
Name
(GenBank) IS607 family element RNA-guided endonuclease TnpB
KO
K07496
putative transposase
Organism
strl Streptomyces sp. RLB1-33
Brite
KEGG Orthology (KO) [BR:
strl00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
HEP84_53230 (tnpB)
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GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
XDO64568
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Position
complement(11774193..11775329)
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AA seq
378 aa
AA seq
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MRSHCGGARAAYNWAVGWVSASWWQRRAEETYGIGEGELTQWRPWSLPALRKEFNAVKRT
DPRFAGWWEDNSKEAYSTGLANAAAAFDNYATSKQGKRRGKKVGMPRFKSKRKARLSCRF
TTGTIRVEPGGRHVTLPRLGTIRVHEPTAKLLGPLRAGTARILSATVRHERGRWFVSFQV
ETAREIRRVTRPDVAVGIDLGVKTLAVLADSTGEIRTIANPRHLDTALRHLHRASHVVSR
RRGPDRRTGQKPSKRWEKANTRRNKVHHRVANLRTDALHKLTTAVTAEFGTVVVEDLNVA
GMLRNRRLARRIADAGFGEIRRQLTYKTRRNGCRVVAADRWFPSSKTCSGCGAVKAKRAT
RGRTPPVRNWPGKGERYG
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
ctgcgctcgcattgtggtggggcgcgggcggcgtacaactgggcggtgggctgggtgtcg
gcgtcgtggtggcagcgccgtgccgaggagacgtacgggatcggagagggcgagctgacg
cagtggcggccgtggtcgctgcccgcgctgcggaaggagttcaacgctgtcaagcgcacc
gacccgcggtttgccgggtggtgggaggacaactccaaggaggcgtactccaccggtctg
gcgaacgccgccgccgcgttcgacaactacgccacgtcgaagcagggcaagcggcggggc
aagaaggtggggatgccccgcttcaagtcgaaacggaaagcccgtctgtcctgccggttc
accaccggcacgatccgcgtcgagcccggcggccggcatgtgacactgccccgcctgggc
acgatccgcgtccacgaacccactgccaagctcctgggacccttgcgggccgggaccgcg
cgcatcctgtccgcgaccgtgcggcacgaacgcggacgctggttcgtctccttccaggtc
gagaccgcgcgggagatccggcgcgtcacccgccctgacgtcgcggtcgggatcgacctc
ggcgtgaaaacgctcgcggtcctggccgacagcaccggtgaaatccgcaccattgccaac
ccccggcacctcgacacagcgctcaggcatctgcaccgggcctcccacgtcgtgtcccgc
cgccggggccccgaccgccgcaccggccagaagccgtcgaaacggtgggaaaaggccaac
acccgccgcaacaaggtgcatcaccgggtggcgaacctgcgcaccgacgccctgcacaag
ctcaccactgccgtgaccgccgagttcggcaccgtcgtggtcgaggacctcaacgtcgcc
gggatgctccgcaaccggcgcctggcccgccggatcgccgacgccgggttcggggagatc
cgccgtcagctcacctacaagacccgcaggaacggctgccgcgtcgtggccgccgaccgc
tggttcccctcctccaagacctgttccgggtgcggcgcggtgaaagccaaacgtgcgaca
cgaggtcgcacacctccagtgaggaactggccagggaaaggagaaagatacggctga
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