Streptomyces sp. Mg1: M444_20835
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Entry
M444_20835 CDS
T03958
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
strm
Streptomyces sp. Mg1
Pathway
strm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
strm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M444_20835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strm03021
]
M444_20835
03400 DNA repair and recombination proteins [BR:
strm03400
]
M444_20835
Enzymes [BR:
strm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M444_20835
Transcription machinery [BR:
strm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M444_20835
DNA repair and recombination proteins [BR:
strm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M444_20835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AKL67438
UniProt:
B4V4X3
LinkDB
All DBs
Position
1:4786895..4787917
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AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEYRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRVDGVL
HEFTTVPGVKEDVTDIILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQLGQEIGRIPIDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcgctcagcgtccttcgctgaccgaagaggtcgtcgacgaataccgctcgcgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactcgctgcgtcgt
accctcctgtcctccatcccgggtgccgctgtcaccagcatccgcgtggacggcgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaagacgtcaccgacatcatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggtcccggcctggtcaccgctgctgacatcgcgcccccggccggtgtcgaggtgcacaac
ccggacctggtcctcgccacgctcaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgtccagaacaagcagctgggccaggagatcggt
cgcatcccgatcgactccatctacagcccggtcctcaaggtcacctacaaggtcgaggcg
acccgagtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcgcccgcgcgacgccatggcgtccgccggcaagaccctggtcgagctgttcggc
ctggcgcgcgagctcaacatcgacgccgagggcatcgacatgggcccctcgccgacggac
gcggccctggccgccgacctggcgctgccgatcgaggagctggagctcacggtccgctcg
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtggcccgctccgag
gccgacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctcgccggcatgggcctggccctcaaggacagcccgcccgggttcgacccgaccgccgcc
gccgacgccttcggcgccgacgacgacgcggacgccggtttcgtcgagaccgagcagtac
taa
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