Streptomyces sp. Mg1: M444_24620
Help
Entry
M444_24620 CDS
T03958
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
strm
Streptomyces sp. Mg1
Pathway
strm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
strm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M444_24620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strm03400
]
M444_24620
Enzymes [BR:
strm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
M444_24620
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
M444_24620
DNA repair and recombination proteins [BR:
strm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M444_24620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Auto_anti-p27
zf-FPG_IleRS
DUF7573
DZR
Motif
Other DBs
NCBI-ProteinID:
AKL68074
UniProt:
B4V5B7
LinkDB
All DBs
Position
1:5621263..5622123
Genome browser
AA seq
286 aa
AA seq
DB search
MPELPEVEVVRRGLERWVAGRTIEDVEVLHPRAVRRHPAGGVDFAARLRGETVGVPQRRG
KYLWLPLAGRDLSVLGHLGMSGQLLVQPADAPDEKHLRIRVRFDDAAGTELRFVDQRTFG
GLSLHDNTPDGLPDVIAHIARDPLDPLFDEAAYHLALRAKRSTVKRALLDQSLISGVGNI
YADEALWRARLHYERPTATLTRPLSAELLGHVRDVMNAALAVGGTSFDSLYVNVNGESGY
FDRSLDAYGREDEPCRRCGTPMRRRPWMNRSSYFCPRCQRPPRVVS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctgcccgaagtcgaagtcgtccggcgcggactggagcgctgggtggcaggg
cggaccatcgaggacgtcgaggtgctgcacccgcgggccgtgcgcaggcaccccgccgga
ggcgtggacttcgccgcgcggctgcggggcgagaccgtcggagtgccccagcggcggggg
aagtacctctggctgcccctcgcggggcgggacctgtccgtgctcggccacctcggcatg
agcgggcagctgctcgtacagcccgccgacgcccccgacgagaagcacctgaggatccgg
gtccgtttcgacgacgccgccggcaccgagctccgcttcgtcgaccagcgcaccttcggc
gggctctcgctccacgacaacacccccgacgggctccccgacgtcatcgcccacatcgcg
cgcgaccccctggacccgctcttcgacgaggccgcctaccacctggcgctgcgtgccaag
cggagcaccgtcaaacgggccctgctggaccagtccctgatcagcggggtcggcaacatc
tacgcggacgaggcgctgtggcgcgcccggctgcactacgagcgccccaccgccaccctc
acccgccccctgagcgcggaactcctcgggcacgtacgggacgtgatgaacgcggccctc
gccgtgggcggcaccagtttcgacagcctctacgtcaacgtgaacggcgaatccgggtac
ttcgaccgctccctcgacgcctacgggcgggaggacgagccctgccggcgctgcggtacg
ccgatgcgccggcggccgtggatgaaccggtccagctacttctgcccgcgctgtcagcgg
ccgccgcgcgtggtgtcgtag
DBGET
integrated database retrieval system
