Streptomyces sp. Mg1: M444_26485
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Entry
M444_26485 CDS
T03958
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
strm
Streptomyces sp. Mg1
Brite
KEGG Orthology (KO) [BR:
strm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
strm03016
]
M444_26485
Enzymes [BR:
strm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
M444_26485
Transfer RNA biogenesis [BR:
strm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
M444_26485
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AKL68387
UniProt:
A0A0G3UPR5
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Position
1:complement(6094853..6096133)
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AA seq
426 aa
AA seq
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MTDAQETAADLRTTTGGGPPDDKVSSDGLPVPLLEPREGIPPVVADAEALAEVVAAFAAG
TGPVAVDAERASGYRYGQRAYLVQLRREGAGSALIDPVGCPDLSSLGEALSGTEWILHAA
TQDLPCLREIGMEPTSLFDTELAGRLAGFPRVGLGAMVEGVLGYVLEKGHSAVDWSTRPL
PEPWLRYAALDVELLVDLRDALEEELDRQGKLEWARQEFDAIAAAPPAPPRKDPWRRTSG
MHKVRRRRQMAVVRELWESRDRIAQRRDVSPGKVLGDAAIVEAALAMPLNAQALSALPGY
GQRMGRRQLEQWMAAVERAKALPENALPQPGATPAGPPPPRSWADKDPAAAARLAAARTA
VSALAEGLNLPQENLITPDTVRRLCWEPPQRLDAGAVTEALAGYGARPWQIEQVTPALVE
ALAVTA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccaagagaccgcagcagacctgcgcaccaccaccgggggcggccccccg
gacgacaaggtttcgtccgatgggctgcccgttcccctgctcgaaccccgtgaggggatc
ccccccgtcgtcgccgacgccgaggcgctcgccgaggtggtcgcggccttcgccgcgggc
accgggcccgtcgccgtcgacgccgagcgggcctccggataccgctacggccagcgcgcc
tacctggtgcagctccggcgcgagggcgcgggttccgcgctcatcgacccggtgggctgc
cccgacctctcctcgctgggcgaagccctgtccggcaccgagtggatcctgcacgccgcc
acccaggacctgccgtgcctgcgcgaaataggcatggagcccacctccctgttcgacacc
gagctcgccggccgcctcgcgggcttcccccgcgtcggcctcggcgcgatggtcgagggc
gtgctgggctacgtactggagaagggccattccgccgtcgactggtcgacccggccgctc
cccgagccctggctgcgctacgccgccctggacgtggagctcctggtggacctgcgcgac
gcgctggaggaggagctggaccggcagggcaagctggaatgggcccgccaggagttcgac
gccatcgccgccgccccgcccgccccgccgcgcaaggacccctggcgccgcacctccggc
atgcacaaggtgcgccggcgccgtcagatggcggtcgtacgggagctgtgggagtcccgg
gaccggatcgcgcagcggcgtgacgtatcaccgggcaaggtgctgggtgacgccgcgatc
gtcgaggccgcgctggcgatgccgctgaacgcgcaggccctgtcggccctgcccgggtac
gggcagcggatgggtcggcgccagctggagcagtggatggcggccgtcgagcgggcgaag
gccctgcccgagaacgccctgccgcagccgggggcgaccccggccggtcccccgccgccg
cgttcctgggcggacaaggacccggcggccgcggcccggctggcggcggcccgcacggcc
gtctccgcgctggccgaggggctgaacctgccccaggagaacctgatcaccccggacacg
gtccgccggctgtgctgggagcccccgcagcggctcgacgcgggcgcggtgaccgaggcc
ctggcgggctacggcgcccgcccgtggcagatcgagcaggtgaccccggcgctggtcgag
gccctggccgtgaccgcctga
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