Streptomyces sp. Mg1: M444_27330
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Entry
M444_27330 CDS
T03958
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
strm
Streptomyces sp. Mg1
Pathway
strm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
strm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M444_27330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strm03400
]
M444_27330
Enzymes [BR:
strm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
M444_27330
DNA repair and recombination proteins [BR:
strm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
M444_27330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AKL68528
UniProt:
B4V283
LinkDB
All DBs
Position
1:6292224..6293009
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AA seq
261 aa
AA seq
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MRIATFNVNSITARLPRLLAWLESSGTDVVCIQETKCSAEQFPHEQLRELGYEAAVNATG
RWNGVALISKVGLEDVVTGLPGGPDYEGVQEPRAISATCGGVRLWSVYVPNGREVEHDHY
GYKLEWFRALTAAVAEDAAGPRPFAVLGDYNVAPTDEDVFDPAVFEGLTHVTPAERAALE
ALRAAGLSDVVPRPLKYDRPYTYWDYRQLAFPKNRGMRIDLVYGNEAFAKAVTDAYVDRE
ERKGKGASDHAPVVVDLSLEG
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgccacgttcaacgtcaactcgatcaccgcccggctgccgcgcctgctggcc
tggctggagagctccggcacggatgtcgtgtgcatccaggagaccaagtgctcggcggag
cagttcccgcacgagcagctgcgcgagctgggctacgaggcggcggtcaacgccaccggc
cggtggaacggcgtggcgctgatctccaaggtcggcctggaggacgtggtcacgggcctg
cccggcggacccgactacgagggcgtccaggagccccgggcgatctccgccacctgcggc
ggggtgcgcctgtggtcggtgtacgtaccgaacggccgcgaggtcgagcacgaccactac
gggtacaagctggagtggttccgcgcgctgaccgccgccgtcgcggaagacgcggccggc
ccgcgcccgttcgcggtgctcggcgactacaacgtggccccgaccgacgaggacgtcttc
gatccggccgtcttcgagggcctgacgcacgtcacccccgccgagcgcgccgccctggag
gcgctgcgggccgccggcctctcggatgtggtgccgcgcccgctcaagtacgaccgcccg
tacacgtactgggactaccgccagctcgccttccccaagaaccggggcatgcgcatcgac
ctggtgtacgggaacgaggccttcgccaaggccgtcaccgacgcctatgtggaccgtgag
gagcgcaagggcaagggcgcctcggaccatgcgccggtcgtcgtggacctcagcctggag
gggtag
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