Entry |
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Name |
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KO |
K03546 | DNA repair protein SbcC/Rad50 |
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Organism |
strm Streptomyces sp. Mg1
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Brite |
KEGG Orthology (KO) [BR:strm00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:strm03400]
M444_28480
DNA repair and recombination proteins [BR:strm03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M444_28480
Archaeal homologous recombinant proteins
M444_28480
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
1:6552871..6555885
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AA seq |
1004 aa
MRLHRLRVTAFGPFAEPQEIDFDALSGAGIFLLHGPTGAGKTSVLDAVCYALYGSVPGSR
QAPGTSLRSDHSAPDTPTEVTLDLTAGGRRLEITRRPEQDRPKKRGTGTTKDKAQSWLRE
RTGEGWEALSRSHQEIGEEIEQLLGMSREQFCQVVLLPQGEFARFLRADEGARGRLLGRL
FDTRRFAAVEALLAERRRAAEAKVRAGDEKVLGTAQRLAQAAGHGADLRDWPMPRHQPGD
PGLAEAVRAWAALARCSARERRTVAEYALAAVEGREAAARRAAEEARGLDRLQRRHTETA
RRAALLAEAAPDRDRVRDLLDRARRGALVAPALEMRGAAYAAHLTAAHAETAARAQLPPA
LAEAGTEQLGSVEQRLREELGAVGAAHRAEQRSAEIGRERATLEREARAAEEQHQESAEW
LARWEDTRAELAERVEAAQQAATLGEQLAGKLEPARMHLTAARRRDGLDAEAEVTSGELL
RVREESAAARERWLELKEARLRGIAAELAEALEEGVPCTVCGSQRHPDPARPAPGHVDRA
AEDAAHARFEEAEERRAAVERKLAAVQEARAEAAAAAGEATTAELLELTADLSSRHAAAH
AAAAGLHAARERLARAEREHAARSSDRLDAERRAAARTSRREALDREQASLEAELALVRG
DAPTVAARARILEDRIRMVTGAAHALRRAETTAARLKEADDQLADAAFKAGFDTIDAAAD
AVLPEYERTALQHRSDAWQAEEAMLADRHAETDTAAAAALPPADPQTAQAHADRAAATLR
TAGSAYDAARVRCAELDRLSRQAEQELRAMGPLREEYDRVARLAGLTAGTSADNERKMRL
EAYVLAARLEQVAAAATVRLLRMSGGRYTLVHSDAKASGRGRSGLGLHVVDAWTGSERDT
ATLSGGETFFASLALALGLADVVTDEAGGMRLDTLFIDEGFGSLDDQALDEVLDVLDSLR
ERDRSVGIVSHVADLRSRVQAQLEIVKQRGGSLVRHRTAAALTD |
NT seq |
3015 nt +upstreamnt +downstreamnt
atgaggctgcaccggctgcgggtcaccgccttcggccccttcgccgagccccaggagatc
gacttcgacgccttgtccggcgccgggatcttcctgctgcacggccccaccggcgcgggc
aagacctccgtgctcgacgccgtctgctacgccctgtacgggtccgtgcccggctcccgc
caggcccccggcaccagcctgcgcagcgatcactccgcccccgacaccccgaccgaggtc
accctcgacctcaccgcgggcggccgccgcctggagatcacccggcgccccgagcaggac
cggcccaagaagcgcggcaccggcacgaccaaggacaaggcgcagagctggctgcgcgag
cgcaccggcgagggctgggaggcgctcagccgctcccaccaggagatcggcgaggagatc
gagcagctgctcggcatgagccgcgagcagttctgccaggtggtgctcctcccgcagggc
gagttcgcgcgcttcctgcgggccgacgagggggcgcgcggccggctgctcgggcggctc
ttcgacacccgccgcttcgccgccgtcgaggccctgctcgccgagcgccgccgggccgcc
gaggcgaaggtacgggccggggacgagaaggtgctcggcaccgcccagcggctcgcccag
gccgccggacacggcgccgacctgcgggactggccgatgccccggcaccagcccggtgac
cccggcctggccgaggcggtccgggcctgggcggcgctcgcccgctgctccgcccgggag
cggcggaccgtcgcggagtacgcgctggccgccgtcgaggggcgcgaggccgccgcccgg
cgcgccgccgaggaggcgcgggggctcgaccgcctgcaacgccggcacaccgagacggcc
cgccgggccgccctgctcgccgaagccgcgcccgaccgggaccgggtgcgcgacctgctc
gaccgggcccggcgcggggccctggtcgcccccgccctggagatgcgcggagccgcctat
gccgcgcacctcaccgccgcccacgctgagacggccgcccgggcgcagctcccgcccgcc
ctcgccgaggccggaaccgagcagctcggctccgtcgagcagcggctgcgggaggaactc
ggagcggtcggcgccgcccaccgcgccgagcagcgcagcgccgagatcggccgcgagcgc
gccaccctggagcgggaggcccgcgccgcggaggagcagcaccaggagtccgccgagtgg
ctcgcccgctgggaggacacccgggccgagctggccgagcgggtggaggccgcccagcag
gccgcgaccctgggcgagcagctcgccgggaagctggaacccgcccggatgcacctcacg
gccgcccggcggcgggacggactcgacgccgaggcggaggtgacctccggcgagctgctg
cgcgtacgggaggagtccgccgccgcccgggaacgctggctggagctgaaggaggcccgg
ctgcgcgggatcgccgccgagctggccgaggcgctggaggagggcgtgccctgcaccgtg
tgcggttcgcagcggcacccggatccggcgcggcccgcccccgggcacgtggaccgggcc
gccgaggacgccgcccacgcccggttcgaggaggccgaggagcgcagggccgccgtcgag
cggaaactcgccgccgtccaggaggcccgcgccgaggccgcggccgccgcgggcgaggcc
accaccgccgaactgctcgaactcaccgccgacctcagctcccggcacgccgccgcccac
gcggcggccgccggactgcacgccgcccgggagcggctcgcccgcgccgagcgggagcac
gccgcgcgcagctccgaccggctcgacgccgagcgccgggccgccgcccggacctcgcgg
cgggaggccctggaccgcgagcaggcctcgctggaggccgagctggccctcgtccggggg
gacgcgcccaccgtcgccgcccgcgcccggatcctggaggaccggatccgcatggtcacc
ggcgccgcccacgcgctgcgccgggccgagaccaccgccgcccgcctgaaggaggctgac
gaccagctggccgacgccgcgttcaaggcgggcttcgacaccatcgacgccgccgccgac
gccgtgctccccgagtacgaacgcaccgcgctccagcaccggtcggacgcctggcaggcc
gaggaggcgatgctcgccgaccggcacgccgagaccgacaccgcggcggccgccgccctg
cccccggccgacccgcagaccgcccaggcccacgccgaccgggccgccgcgacactccgt
acggccggctcggcgtacgacgcggcccgggtccgctgcgccgagctcgaccggctctcc
cggcaggccgagcaggaactgcgcgcgatggggccgctgcgcgaggagtacgaccgggtg
gcccggctcgccggactcaccgcgggcacctccgccgacaacgagcgcaagatgcggctg
gaggcgtacgtcctggccgcccggctggagcaggtcgccgccgcggcgacggtacggctg
ctgcgcatgtccggcggccgctacaccctggtccactcggacgcgaaagcgagcggacgc
ggccgttcgggtctcggcctgcacgtggtggacgcctggaccggcagcgagcgggacacc
gccaccctctcgggcggcgagaccttcttcgcctcgctcgccctggccctgggcctcgcg
gacgtggtcaccgacgaggcgggcgggatgcggctcgacaccctgttcatcgacgagggc
ttcggcagcctcgacgaccaggcgctggacgaggtgctcgacgtactggactcgctgcgc
gaacgggaccgcagcgtcggcatcgtgagtcacgtcgcagatctgcgcagccgggtgcag
gcacagctggagatcgtcaagcagcgcggcggttctctggtgcgccaccgcaccgcggcc
gccctcacggactga |