Streptomyces sp. Mg1: M444_34825
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Entry
M444_34825 CDS
T03958
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
strm
Streptomyces sp. Mg1
Brite
KEGG Orthology (KO) [BR:
strm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strm03021
]
M444_34825
Transcription machinery [BR:
strm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M444_34825
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
GerE
MarR_2
HTH_Crp_2
HTH_23
KORA
HTH_10
DUF7343
HTH_3
NirdL-like_HTH
HTH_37
HTH_31
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AKL70597
UniProt:
B4UZ87
LinkDB
All DBs
Position
pSMg1-1:complement(77898..78818)
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AA seq
306 aa
AA seq
DB search
MSHVATATNPAREAAPDAFTRAESAAATGQLAGPLPRIDNAREVTPADARELSRLFLVRL
RELEEGTRDYQYARNTLIEMNISLVRFAARRFTARINAGIELDDVIQVGTIGLIKAIDRF
DPDREVEFSTLALPYITGEIKRYFRDTTWAVHVPRRLQELRVELAKCQETLTEVLGRAPS
VKEIAEHLELSEEEVIEGLVAANGYSSASLDSTAGTTDRPAALSEGRPLADTVGDIDPAM
VLFEDVHTLAPLLSELDERDLQILRMRFAREMTQAEIGTELGISQMQVSRLLTRILTRLR
SGMLAA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacgtcgccacggccaccaatcccgcccgggaggcagccccggacgccttcacc
cgcgccgaatccgcagccgccaccgggcagctcgcggggcccctgccgcggattgacaac
gcccgcgaggtgacgccggcggacgcgcgggagctgtcgcgtctgttcctggtgcggctg
cgggagctggaagaggggacgcgtgactaccagtacgcgcgcaacaccctgatcgagatg
aacatctccctcgtccgcttcgccgcccgccgcttcacggcccgcatcaacgccggtatc
gagctcgacgacgtcatccaggtcggcacgatcggcctgatcaaagccatcgaccgtttc
gatcccgaccgcgaggtcgagttctccactctcgccctcccttacatcaccggcgagatc
aagcggtacttccgcgacaccacctgggccgtgcacgttccccgccgtctgcaggaactc
cgcgtcgaactcgccaagtgccaggagaccctcaccgaggttctcgggcgcgcaccgagc
gtcaaagagatcgccgagcacctcgaactctccgaggaagaggtcatcgagggactggtg
gccgccaatggctacagcagcgcctccctggactcgaccgccggcaccaccgaccgcccg
gccgccctcagcgagggcaggccgcttgcggacacggtcggcgacatcgatccggcgatg
gtcctcttcgaggacgtccacaccctcgcgccacttctgagtgaactcgacgagcgcgac
ctgcagatcctccggatgcgtttcgcccgtgagatgacccaggccgagatcggtaccgaa
ctcggcatctcgcagatgcaggtgtcccgcctgctcacccgcatcctgacccgcctgcgc
agcggcatgctcgccgcctaa
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