Streptomyces sp. Mg1: M444_35165
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Entry
M444_35165 CDS
T03958
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
strm
Streptomyces sp. Mg1
Brite
KEGG Orthology (KO) [BR:
strm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strm03021
]
M444_35165
Transcription machinery [BR:
strm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M444_35165
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
KORA
MarR_2
PF0610-like_N
GerE
Sigma70_ECF
DUF7343
HTH_Crp_2
HTH_3
HTH_37
Motif
Other DBs
NCBI-ProteinID:
AKL70652
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All DBs
Position
pSMg1-1:complement(142133..143041)
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AA seq
302 aa
AA seq
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MSQTATITNTTGAVETLPDAASGSGLPSRILPQFDDARQVAPADARELSRLFLIRLRSLE
EGTREYQYTRNTLIEMNISLVNFAARRFRSRAGGGVDIEDIVQVGTIGLIKAIDRFDPDR
EVEFSTLALPYISGEIKRFFRDTTWAVHVPRRLQELRSELAKSQDALTEVFGRAPTVKEI
AEHLELSEDDVIEGLVAANGYTSGSIDAATSSRQRTSGETEGRSLAETVGEVDPDMELFE
EFHTLAPLLQSLKERDRRILAMRFGEEMTQAEIGTELGISQMQVSRLLTRVLTRLRTAML
AE
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaccgccacgatcaccaacaccaccggcgcggtggagactctcccggacgcc
gcatccgggagcggactgccctcacggatccttccccagtttgacgacgcccgtcaggtg
gcgcccgccgacgcccgggagctttcccgcttgttcctgatccggctgcggtctctggaa
gagggaacccgcgagtaccagtacacccggaacaccctcatcgagatgaacatctccctg
gtgaacttcgccgcccggcgattccgcagccgtgccggaggcggcgtcgacatcgaggac
atcgtccaggtgggcacgatcgggttgatcaaggccatcgaccgcttcgaccccgaccgg
gaggtcgagttctccaccctcgccctcccctacatcagcggcgagatcaagcgattcttc
cgcgacaccacctgggccgtccacgtcccgcgccgccttcaggagctgcgcagcgaactc
gccaagagccaggatgcgctgaccgaggtcttcggccgggcccccaccgtcaaggaaatc
gccgagcatctcgaactctccgaggatgacgtcatcgagggtctggtggccgccaacggc
tacaccagcggatccatcgacgccgccacgagttccaggcagcggacctcaggggagacc
gaaggccgctcactcgccgaaacggtcggcgaggtcgaccccgacatggagctcttcgag
gaattccacaccctcgcacccctcctccagtcgctcaaggagcgcgaccgacgcatcctg
gccatgcgtttcggcgaggaaatgacccaggcggagatcggcaccgaactcggtatctcc
cagatgcaggtctcccgcctcctcacccgcgtacttacccgactgcgcacagcaatgctt
gccgagtag
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