Streptococcus sp. NPS 308: SNAG_0430
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Entry
SNAG_0430 CDS
T05541
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
strn
Streptococcus sp. NPS 308
Pathway
strn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
strn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SNAG_0430 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strn03019
]
SNAG_0430 (groL)
03110 Chaperones and folding catalysts [BR:
strn03110
]
SNAG_0430 (groL)
03029 Mitochondrial biogenesis [BR:
strn03029
]
SNAG_0430 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
strn04147
]
SNAG_0430 (groL)
Enzymes [BR:
strn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SNAG_0430 (groL)
Messenger RNA biogenesis [BR:
strn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SNAG_0430 (groL)
Chaperones and folding catalysts [BR:
strn03110
]
Heat shock proteins
HSP60 / Chaperonin
SNAG_0430 (groL)
Mitochondrial biogenesis [BR:
strn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SNAG_0430 (groL)
Exosome [BR:
strn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SNAG_0430 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SNAG_0430 (groL)
Exosomal proteins of breast cancer cells
SNAG_0430 (groL)
Exosomal proteins of colorectal cancer cells
SNAG_0430 (groL)
Exosomal proteins of bladder cancer cells
SNAG_0430 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4142
Motif
Other DBs
NCBI-ProteinID:
BAV79332
LinkDB
All DBs
Position
395589..397211
Genome browser
AA seq
540 aa
AA seq
DB search
MAKDIKFSSDARSAMVRGVDILADTVKVTLGPKGRNVVLEKSFGSPLITNDGVTIAKEIE
LEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGIKNVTAGANPIGIRRGIE
AAVAAAVEALKNNAIPVANKEAIAQVAAVSSRSEKVGEYISEAMEKVGKDGVITIEESRG
METELEVVEGMQFDRGYLSQYMVTDSEKMVANLENPYILITDKKISNIQEILPLLESILQ
SNRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVIT
EDLGLELKYATIEALGQAARVTVDKDSTVIVEGAGNPEAISHRVAVIKSQIETTTSEFDR
EKLQERLAKLSGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEGIVAGGGTALANV
IPAVADLELTGDEATGRNIVLRALEEPVRQIAHNAGFEGSIVIDRLKNAELGTGFNAATG
EWVNMIEEGIIDPVKVSRSALQNAASVASLILTTEAVVANKPEPVAPAPAMDPSMMGGMM
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagacattaaattttcatcagacgctcgttcagctatggttcgtggcgttgat
attctagcagatactgttaaagtaactttgggacctaaaggtcgtaacgttgtgttggaa
aaatcattcggttcaccgctcatcaccaacgacggggtgaccattgccaaagaaatcgag
ttggaagaccattttgaaaatatgggtgctaaattggtatcagaagtggcttcgaagacc
aacgatatcgcaggtgatggaacgacaactgcaactgtcttgacccaagctatcgtccgc
gaaggaatcaaaaacgttactgcaggtgccaatccaatcggtatccgtcgggggattgaa
gcagcggttgccgcagcagtagaagctttgaaaaacaatgccattccagttgccaacaaa
gaagccatcgctcaggttgctgccgtatcttctcgttctgagaaagttggtgaatacatc
tctgaagctatggaaaaagttggcaaagatggagtcatcactatcgaagagtcacgtggt
atggaaacggaacttgaagttgttgaaggaatgcagtttgatcgcggttacctatcacag
tacatggtgacagatagcgaaaaaatggtggcgaaccttgaaaatccatatatcttgatt
accgacaagaagatttctaatatccaagaaatcttgccactcctagaaagtattcttcaa
agcaatcgtccgctcttgattattgcagatgatgtagatggcgaagctcttccaaccctt
gtattgaacaagattcgtggaaccttcaacgtagtagcagttaaggcacctggctttggt
gaccgtcgtaaagccatgcttgaagatatcgctatcttgacaggtggaacagtcatcaca
gaggatcttggtcttgagttgaaatatgctactattgaggcgcttggtcaagcagctaga
gtgactgtggacaaagatagcactgttatcgtagaaggtgctggaaatcctgaagctatt
tctcaccgtgttgcggttatcaagtcacaaatcgaaaccacaacttctgaattcgaccgt
gaaaaactccaagaacgcttggctaaattgtcaggtggtgtcgcagtcatcaaggtcggt
gcagcaactgaaactgagttgaaggaaatgaaacttcgtatcgaagatgccctcaacgct
actcgtgcagctgttgaagaaggaatcgttgctggtggtggaactgctcttgccaatgtc
attccagccgttgctgatttggaattgacaggtgatgaagcaacaggacgcaatattgtt
ctccgtgccttggaagaacctgttcgtcaaattgcccacaatgcaggatttgaagggtct
atcgttatcgatcgcttgaagaatgctgagcttggtacaggtttcaacgcagcaactggt
gagtgggttaatatgattgaagaaggaatcatcgacccagttaaggttagccgttctgcc
cttcaaaatgcagcatctgtagctagcttgatcttgactacagaagcagtcgtagccaat
aaacctgaaccagtagcacctgctccagccatggatccaagcatgatgggcggaatgatg
taa
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