Streptococcus sp. NPS 308: SNAG_0876
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Entry
SNAG_0876 CDS
T05541
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
strn
Streptococcus sp. NPS 308
Brite
KEGG Orthology (KO) [BR:
strn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
strn03016
]
SNAG_0876 (truB)
Enzymes [BR:
strn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SNAG_0876 (truB)
Transfer RNA biogenesis [BR:
strn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SNAG_0876 (truB)
Prokaryotic type
SNAG_0876 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
BAV79752
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All DBs
Position
844647..845525
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AA seq
292 aa
AA seq
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MNGIINLKKEAGMTSHDAVFKLRKILGTKKIGHGGTLDPDVVGVLPIAVGKATRMVEFMQ
DEGKVYEGEITLGYSTTTEDASGEVVAETPVLSPLDEKLVDEAIASLTGAITQIPPMYSA
VKVNGRKLYEYARAGQEVERPERQVTIYSFERTSPISYENNLARFTFRVKCSKGTYIRTL
SVDLGEKLGYAAHMSHLIRMSAAGLKLEDALTLDEIAAKVEAGQLDFLYPLEIGTGDLVK
VFLSPEEATEVRFGRFIELDQTDQELAAFEGDKLLAILEKRGNLYKPRKVLG
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtattatcaacttaaaaaaagaagcgggcatgacctcgcatgatgcggttttt
aaactgcgtaagattttgggaactaagaaaattggtcatggtgggaccttggatccggat
gtggtgggtgttttgcctattgcggtgggcaaggcaacccgtatggtcgagttcatgcag
gatgagggcaaggtctatgagggggagattactctgggctattcaacgacgacagaggat
gccagtggggaagtggttgctgagacccctgttttgtcgcccttggatgaaaagcttgtc
gatgaagcgatcgctagtctgactggggctatcacccagattcctcccatgtactcagct
gtcaaggtaaatgggcgtaagctctatgaatatgcgcgtgctggtcaggaggtggagcgt
ccagaacgtcaggtaactatttatagctttgagcggaccagtccgatctcttatgaaaac
aatcttgcacgctttacttttcgcgtaaaatgcagtaagggaacttatatccgtacctta
tcggttgacttaggagagaagctgggctatgcagcccatatgtcccatttgatacggatg
agtgctgcaggtttgaagctagaagatgctcttaccttggacgaaattgctgcaaaagtg
gaggctgggcaactggattttctttatcccttagagattggaacaggggatcttgtcaaa
gtttttctaagtccagaagaggctacagaagtgcgctttggtcgttttattgagctagac
caaacggaccaagaattagctgcctttgagggagacaaattgctagctattctagaaaaa
cggggcaatctctacaagccaagaaaggttcttggctag
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