Streptococcus sp. NPS 308: SNAG_0942
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Entry
SNAG_0942 CDS
T05541
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
strn
Streptococcus sp. NPS 308
Pathway
strn03420
Nucleotide excision repair
strn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
strn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SNAG_0942 (pcrA)
03430 Mismatch repair
SNAG_0942 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strn03400
]
SNAG_0942 (pcrA)
Enzymes [BR:
strn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SNAG_0942 (pcrA)
DNA repair and recombination proteins [BR:
strn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SNAG_0942 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SNAG_0942 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAV79817
LinkDB
All DBs
Position
913749..916037
Genome browser
AA seq
762 aa
AA seq
DB search
MNALLNGMNDRQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKMVNPWNILAITF
TNKAAREMKERAYGLNPATQDCLIATFHSMCVRILRRDADHIGYNRNFTIVDPGEQRTLM
KRILKQLNLDPKKWNERTILGTISNAKNDLIDDVAYAAQAGDMYTQIVAQCYTAYQKELR
QSESLDFDDLIMLTLRLFDQNPDVLTYYQQKFQYIHVDEYQDTNHAQYQLVKLLASRFKN
ICVVGDADQSIYGWRGADMQNILDFEKDYPKAKVVLLEENYRSTKTILQAANDVIKNNKN
RCPKNLWTQNADGEQIIYYRANDEQDEAVFVAKTIDELGRSQNFLHKDFAVLYRTNAQSR
TIEEALLKSNIPYTMVGGTKFYSRKEIRDIIAYLNLIANLSDNISFERIINEPKRGIGPG
TVEKIRDFANMQDMSMLDASANIMLSGIKGKAAQSIWEFANMILDLREQLDQLSITELVE
AVLEKTGYVEILNTQATLESKARVENIEEFLSVTKNFDDNPDSQEETGLDKLSRFLNDLA
LIADTDSGSQETSEVTLMTLHAAKGLEFPVVFIIGMEENVFPLSRAAEDPDELEEERRLA
YVGITRAEKILYLTNANSRLLFGKTNYNRPTRFINEISSDLLEYQGLARPANTSFKASYS
SGGIAFGQGMSLAQALQERKRKAAPSSIQSSSLPFGQYTAGNKTDTSDTNWSIGDIALHK
KWGEGTVLEVSGSGDTQELKINFPEVGLKKLLASVAPIEKKI
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcattattgaatggaatgaatgaccgtcaggctgaggcggtgcaaacgacagaa
ggccccttgttaatcatggcgggggctggctctggaaagactcgtgttttgacccaccgt
attgcttatttgattgatgaaaaaatggtcaatccttggaatatcttggccattaccttt
accaacaaggctgcgcgtgagatgaaagagcgtgcttatggtcttaatccagctactcaa
gactgtctaattgcgacttttcactccatgtgtgttcgtattctgcgtcgtgatgcagat
catatcggctacaatcgtaatttcactattgtagatcctggtgaacagcgaaccctcatg
aaacgaatcctcaagcaattaaacttggaccctaaaaaatggaatgaacgaactattttg
gggactatttccaatgctaagaatgacttgattgatgatgtggcttatgctgcccaagct
ggagatatgtacacgcaaatcgtggcccagtgttacacagcctatcagaaagagcttcgt
cagtctgagtcccttgactttgatgatttaatcatgttgaccctgcgtctttttgatcaa
aatcctgatgtcttgacctactaccagcagaagttccaatacattcacgtggatgagtac
caagataccaaccatgcccagtaccaattagtcaaactcttggcatctcgctttaaaaat
atctgtgtagttggagatgctgaccagtccatctacggttggcgtggtgcggatatgcaa
aatatcttagattttgagaaagactatcccaaagccaaggttgtcttgttagaagaaaac
tatcgctcaaccaaaaccattctccaagccgccaatgatgtcattaaaaataataaaaat
cgttgtcctaagaatctctggactcagaatgctgatggggagcagattatttactatcgt
gcaaatgacgaacaagatgaggctgtttttgtagccaaaaccattgatgaacttggtcgt
agccaaaactttcttcacaaagactttgcagttctttatcggactaatgcgcaatctcgt
actattgaggaggccctcctcaagtctaatatcccttatactatggttggtgggaccaag
ttctacagtcgtaaggaaatccgtgacattatcgcttatcttaacctcattgccaatctg
agtgacaatatcagttttgagcgcattatcaacgagccgaaacgtggaattgggccaggt
actgttgagaaaattcgcgactttgctaatatgcaagatatgtctatgctggatgcttca
gcaaatatcatgttatctggtatcaagggtaaggcagcccagtctatctgggagtttgcc
aatatgattttggatttgcgagagcaactggatcaattaagcataacagagttggttgaa
gcagttcttgaaaaaacaggttatgtcgagattcttaatacccaagcaaccttagaaagc
aaggctcgggttgagaatatcgaagagttcctatctgttacaaagaattttgacgacaat
cctgatagtcaagaagaaacaggtttggataaactcagtcgtttcttgaatgacttagcc
ttgattgcggatacggactctggtagtcaggaaacatcggaagtgaccttgatgaccttg
catgctgctaaggggcttgagtttccagtcgtctttatcatcgggatggaggaaaatgtc
tttcctcttagtcgagcagctgaggatcctgatgagctggaagaagagcgccgtttggcc
tatgtcggtattacgcgtgctgaaaaaatcctctatctaaccaatgccaactctcgatta
ctgtttgggaagaccaactataaccgtccaacacgtttcatcaatgaaatcagttcggac
ttacttgaatatcaaggcttggctcgaccagctaacaccagtttcaaggcttcttatagc
agtggtgggattgctttcggtcaaggtatgagcttagctcaggcgcttcaagaacggaaa
cgcaaggctgcaccaagctctatccagtcaagtagtctcccgtttggacaatatacagct
ggaaataaaactgatacgagcgataccaactggtctattggtgacattgcccttcacaag
aaatggggagaaggcactgttctggaggtctcaggtagtggcgatacgcaggaactgaaa
atcaatttcccagaagtggggctgaaaaaactcctagccagtgttgctccaattgagaaa
aaaatctaa
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