Streptococcus sp. NPS 308: SNAG_1004
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Entry
SNAG_1004 CDS
T05541
Symbol
rexB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
strn
Streptococcus sp. NPS 308
Brite
KEGG Orthology (KO) [BR:
strn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strn03400
]
SNAG_1004 (rexB)
Enzymes [BR:
strn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SNAG_1004 (rexB)
DNA repair and recombination proteins [BR:
strn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SNAG_1004 (rexB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
Arg_decarb_HB
DUF3106
Motif
Other DBs
NCBI-ProteinID:
BAV79879
UniProt:
A0A1E1GAS1
LinkDB
All DBs
Position
complement(982802..986077)
Genome browser
AA seq
1091 aa
AA seq
DB search
MKLLYTDIRTSLTEILTREAEELVAAGKRVFYIAPNSLSFEKERAVLECLSQQASFAITV
TRFAQMARYLVLNDLPAKTSLDDIGLGMAFYKCLAELDPKDLRVYGAIKQDPQFIQQLVE
LYHEMTTAQMSFLDLESLTDEDKRADLLLIFEKVTTYLNQGQLAQGSQLSHLIEAIENGK
VSSDFSQIALIIDGFTRFSAEEERVVDLLHRKGVEIVIGAYASKKAYTSPFSEGNLYQAS
VEFLHHLGAKYQTPAQDRSQTHEKMDSFDKASRLLESSYDFSELALDVDEKDRENLQIWS
CLTQKEELELVARSIRQKLHDHPELSYKNFRILLGDVASYQLSLKTIFDQYQIPFYLGRS
ESMAHHPLTQYVESILRLKRYRFRQEDLINLLRTGLYSDLSQADIDAFEQYLRYLGINGM
PAFQQTFTKSHHGKFDLERLNALRLRVLAPLETLFASRKQKTENLLQKWNTFLKNATLSK
QMQGLTATMETLEQERQAEVWKAFCHVLEQFATVFAGTQVSLEDFLALLHSGMSLSQYRT
IPATVDTVLVQSYDLIAPLTADFVYAIGLTQDHLPKIAQNTSLLTDEERQSLNQATEEGA
QLLIASSENLKKNRYTMLSLANAARKQLVLSAPSLLNENESKESAYLQELVSFGFNRTEK
KIHHKGLSKDDMGSYHSLLSSLVAYHQQAGSSENEKDVTFVKVLARVMGKKLDQKGLTNP
ALPTSPSSKPLEKETLQALYPADKEFYLSTSGLTEFYRNEYSYFLRYVLGLQEELRLRPD
ARSHGNFLHRIFERALKLPDEDSFDQRLEQAIQETSQEREFEAIYQESLEAQFTKEVLLD
VARTTGHILCHNPAIETIQEEAIFGGKDQAFIQLDNGRSVHVRGKVDRIDRLKADGALGV
VDYKSSLTQFQFPHFFNGLNSQLPTYLAALKKEGEQNFFGAMYLEMAEPVQSLLAVKSLA
GAVVEASKSMKYQGLFLEKESSHLGEFYNQNKANQLTDEEFQLLLDYNAHLYKKAAEKIL
QGQFAINPYTENGRSIAPYVQQHQAITGFEANYHLGQARFLERLDLADGKRLVGEKLKQA
WFEKMREELNR
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgaaattactgtatactgatattcggacttctttgactgaaattttaacgagagaggca
gaagagctagttgctgcaggcaagagggtcttttatatcgccccaaactctctttcattt
gaaaaggaacgcgccgtgctggaatgcttgtcccagcaggcttcttttgcgattaccgtc
acgcgtttcgctcaaatggctcgttacctggttttaaatgatttgcctgccaagaccagt
cttgatgacatcgggcttgggatggctttttataagtgccttgcggaactcgatcccaag
gacttacgtgtttatggtgcaattaagcaggatcctcaatttatccagcagttggttgaa
ctttatcatgagatgacgactgctcagatgagctttttggacttggaaagtttgacggat
gaggataaacgagcagatttactcttgatttttgagaaagtaacaacctatctcaatcaa
ggtcagttggctcagggaagtcagttgtcccatttgattgaggctattgaaaatggcaag
gtaagtagtgattttagtcagattgccttaatcattgacggatttacccgtttttctgct
gaggaagagcgtgtagtggatctgctccatcgaaaaggtgtcgagattgtcattggggct
tatgcaagcaagaaggcttataccagtccgttctctgaagggaatctctaccaagccagt
gtggagtttcttcatcatttgggggcaaaataccaaacacctgctcaggatcgttctcag
acacatgagaaaatggatagttttgacaaggcctctcgtttgctggagtcttcttatgac
ttttcagaactcgctttagatgttgatgagaaggaccgtgaaaatctgcaaatctggtct
tgtttgacgcaaaaagaagagctggaattagtagcccgtagcattcgtcagaaattacat
gaccatccagaactgagttacaagaatttccgtattttgctgggtgatgtggcatcttac
cagctatcactgaaaactatttttgaccagtaccagattcctttctatcttggtagaagt
gaatccatggctcatcatcccttgactcagtatgtcgaatctattttgcgtttgaaacgt
taccgtttccgtcaggaggatttgattaatctcctcagaactggtctgtattctgacctt
agccaggctgatattgatgcttttgagcaatatctccgctatcttggcatcaatggcatg
ccagcttttcagcagacctttacaaaatcccatcatggaaaatttgatttagagcgtcta
aatgctcttcgtctgcgagttttggcgccacttgaaaccttatttgcgagtcggaagcaa
aagactgaaaatctcttgcaaaagtggaatacttttctaaaaaatgctactttaagcaag
cagatgcaaggattgacagctactatggaaactctagaacaggaaagacaagccgaagtt
tggaaggctttctgccatgttttagaacaatttgcgaccgttttcgctggtacacaggtt
agtctagaggatttcctagccttgctccattctggaatgagcttatcccagtatcgtacc
attccagcgacagtggacaccgttctggtgcaaagttacgatctgattgcccctctgaca
gctgattttgtctacgccatcgggctgactcaggatcatttgccaaaaatcgcgcaaaac
accagtcttttgacagacgaagaaagacaaagtctaaatcaagcaactgaggagggagcg
caattactgattgcaagtagtgaaaacctcaagaaaaatcgctataccatgctttcctta
gccaatgctgctcgtaagcagttggtgttatccgctccaagtctcctcaatgaaaatgag
agtaaggaatcggcctatcttcaagaactggtgagttttggatttaatcggacagagaag
aagattcatcacaaaggtctgtctaaggatgatatgggttcttatcacagtctcttgtct
agcttagttgcctatcatcagcaggcaggttctagtgaaaatgaaaaagatgtgaccttt
gtcaaggttctggcgcgtgtgatggggaaaaaacttgatcaaaaaggtcttacaaatcca
gcactcccaactagcccaagcagcaaaccattagagaaagagaccttgcaggctctctat
ccagctgacaaggagttttacctgtctacgtctggtttgacggagttttaccgcaatgaa
tacagttatttcctccgttatgtcttaggtttgcaggaagaattgcgccttcgtcctgat
gctcgcagtcacgggaatttcttgcatcgtatttttgaacgtgccttgaaactgcctgat
gaagattcctttgaccaacgtctggaacaagctattcaagaaaccagccaagaacgcgaa
tttgaggctatttatcaggaaagtttggaagcgcagtttaccaaggaagttctgcttgat
gtcgcgcgaactacgggccacatcctttgtcataatccagctatcgaaaccatccaagag
gaggcaatatttggcggtaaggaccaggcctttattcaattggataatggtcggagtgtc
catgtgcgaggcaaggttgaccgcattgaccgcttgaaagctgatggagcactaggagtg
gtggactacaagtctagtttgacccagttccagtttcctcatttctttaatgggctcaat
tcccagttgccaacctatcttgctgcccttaaaaaggaaggggagcagaactttttcggt
gccatgtacttggaaatggctgagcctgtccaatctttattagctgttaaaagtctggca
ggagcagtagtagaagccagcaaatcaatgaaataccaaggactctttttagaaaaagaa
agcagtcacttgggagagttttataaccaaaacaaggctaatcagctgacagacgaggaa
ttccagctcttattggactacaatgcccatctttacaagaaggcagctgagaagatttta
caaggccagtttgccattaatccctataccgaaaatggcagaagcattgccccatacgtc
cagcaacaccaagccatcacaggttttgaagcaaattaccacttgggacaagcccgtttc
ctagagaggttagacttagctgacggaaagcgtctggtcggagaaaagctcaagcaagct
tggtttgaaaaaatgagagaggagttgaatcgatga
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