Streptococcus sp. NPS 308: SNAG_1105
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Entry
SNAG_1105 CDS
T05541
Symbol
polC_2
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
strn
Streptococcus sp. NPS 308
Pathway
strn03030
DNA replication
strn03430
Mismatch repair
strn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
strn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SNAG_1105 (polC_2)
03430 Mismatch repair
SNAG_1105 (polC_2)
03440 Homologous recombination
SNAG_1105 (polC_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
strn03032
]
SNAG_1105 (polC_2)
03400 DNA repair and recombination proteins [BR:
strn03400
]
SNAG_1105 (polC_2)
Enzymes [BR:
strn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SNAG_1105 (polC_2)
DNA replication proteins [BR:
strn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SNAG_1105 (polC_2)
DNA repair and recombination proteins [BR:
strn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SNAG_1105 (polC_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
Inhibitor_I9
DNA_pol_B_exo2
Motif
Other DBs
NCBI-ProteinID:
BAV79979
LinkDB
All DBs
Position
complement(1079824..1080417)
Genome browser
AA seq
197 aa
AA seq
DB search
MEKLRDYIAFDLEFNQHDGVTHLIQVSAVRFQDGQESAAFDSYVYTTAPLKSFINGLTGI
TAETLKDAPKVEQVLKDFQAFVGKSPIVGYNAAKSDLPILLEHGLDYRDQYKVDLYDEAF
ERRSSDLHGIANLKLQTVANFLGFKGQSHNSLEDARMTARVYEAFLESDEGKLLIEDQSS
FSMNNPFGSLDLSQFLD
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattacgagattatattgcctttgatttagagtttaatcaacacgatggggtt
acccatttaattcaagtatcagcagtccgctttcaagatggacaagaaagtgctgctttt
gattcttatgtttatactacagccccattgaagagttttatcaatggtttgactgggatc
acagctgaaaccttgaaagatgcgccgaaagtagagcaagttttaaaagattttcaggcc
tttgttggcaaatcaccaatcgttggctacaatgcagctaagagtgatttaccaattctc
ttggagcacggtttggactatcgtgaccagtataaggtcgacctatatgatgaggctttt
gaacgccgtagttctgatctacacggcatagccaatctcaaattgcaaactgtggcgaat
tttttagggtttaaaggacaatcgcataatagtttagaagatgcgcgtatgacagcgcgt
gtttatgaagcctttttggaatcggatgaaggaaagctattaatagaagaccagagtagt
ttttctatgaataatcctttcggtagcttagatttatcccaatttttagactag
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