Streptococcus sp. NPS 308: SNAG_1564
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Entry
SNAG_1564 CDS
T05541
Symbol
recD2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
strn
Streptococcus sp. NPS 308
Pathway
strn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
strn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SNAG_1564 (recD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strn03400
]
SNAG_1564 (recD2)
Enzymes [BR:
strn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SNAG_1564 (recD2)
DNA repair and recombination proteins [BR:
strn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SNAG_1564 (recD2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
UvrD-helicase
DEAD
UvrD_C
HHH_5
Herpes_Helicase
nSTAND3
AAA_22
RsgA_GTPase
5_3_exonuc
DNA_pol_lambd_f
AAA_28
AAA_29
AAA_12
SLFN-g3_helicase
AAA
NTPase_1
AAA_25
TsaE
Motif
Other DBs
NCBI-ProteinID:
BAV80433
LinkDB
All DBs
Position
1536252..1538621
Genome browser
AA seq
789 aa
AA seq
DB search
MEVYFSGTIERIIFENISNFYRILLLDIEDTNAEDFDDFEIIVTGTMADVIEGEDYTFWG
QIVQHSKYGEQLQISRYERAKPTSKGLVKYFSSSHFKGIGLKTAQKIVDTYGENTIDEIL
EHPEKLESIAGLSAKNREAFVSTLRLNYGTEMVLAKLANYGIPNKLAFQIQDFYKEETLD
IVENYPYQLVEDIKGLGFTIADQLAAELGIESQAPERFRAGLVHSLFQGCMDTGNTYMEA
RDLLEQTLTLLESSRPVELNPSQVAQELSHLIEEDKVQQIDTKIFDNSLFFAEEGIRSHL
VRILEKGKQKSQDLESIHKHISTVEQELGIQYDSIQKQAICDAIQNKVFILTGGPGTGKT
TVINGIIAVYALLEGLDFKKKSNLPILLAAPTGRAARRMNELTGLPSATIHRHLGMTGDD
DTSHLEDYLDADFIIVDEFSMVDTWLANQLFSNISSNSKILIVGDSDQLPSVSPGQVLAD
LLQIALIPQTRLERIYRQSEESTIVTLASQIRQGILPADFTQKKADRSYFEIASGHIPAT
IEKILGAALRSGILARDIQVLAPMYRGTAGIDAINQLMQDLLNPQQKGQVSFEATQCHYR
TGDKVIHLVNDAEVNVFNGDLGYITDLIPGKYTESKQDEIVIDFDGNEVIYPRNEWYKIR
LAYAMSIHKSQGSEFPVVILPITSASKRMLERNLIYTAITRAKSKLILLGELQAFDYAVK
HIGTARKTYLIERFSDLIETNIEESKQAFSETATASDSEQSCILTEENWSSIPAMIGITD
ADLKEIFGK
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggaagtttatttttcaggcaccattgaacgcattatttttgaaaatatcagtaatttc
tatcgcatcctcctcctagatatcgaagataccaatgcggaggactttgacgattttgaa
atcatcgttacaggaaccatggcggacgtgattgagggcgaagactatactttttggggg
caaatcgttcagcactccaagtatggggaacagctacaaatcagtcgttatgagcgagca
aaacccactagtaagggtctagtcaagtacttttctagcagccatttcaagggaatcggt
ctcaagactgcccagaaaattgttgatacctatggtgaaaacactatcgacgaaattctg
gagcatcctgaaaagctggaaagtattgctggactctctgcaaaaaaccgtgaggctttt
gtttccaccctccgtctcaactatgggacagaaatggtcttggctaaacttgccaactac
ggcattcccaataaactggcctttcagattcaagacttttacaaggaagaaacgctggat
attgtcgaaaactatccctaccaactggttgaagatatcaagggcttgggttttaccatt
gctgaccaattagccgccgaactaggcatcgaaagtcaagcccctgaacgcttccgtgct
ggccttgtccatagtctctttcaaggttgtatggatacgggcaatacctatatggaggcc
cgtgatttactggaacagacacttaccctcctcgagtcttcccgtcccgtggaactgaac
cccagccaagtcgctcaggaattatctcatctgattgaagaagacaaggttcagcagatt
gataccaaaatctttgataacagcctcttttttgctgaggaaggtattcgcagtcacttg
gttcgtatccttgaaaaaggaaaacagaagagccaagatctagaaagcattcacaagcat
atctctactgtcgagcaagaactggggattcagtacgatagcattcaaaagcaggctatc
tgtgacgctatccagaacaaggtctttatcctgacaggtggacctggtactggtaagacg
actgttatcaatggtattatcgctgtttatgccctcttagaaggactcgatttcaagaag
aaaagtaacttacctattcttctcgctgccccaactggtcgagcggctcggcgcatgaat
gaattgacaggattgccaagcgcgaccatacaccgccatttgggaatgacgggagacgat
gataccagccatctggaagattatctagatgccgactttatcattgtagatgagttttcc
atggtggatacttggttagccaaccagctcttctccaacatttcttctaacagtaaaatc
ctcattgtgggtgatagcgaccagctaccttctgtcagtcctggccaagttctggccgac
ctgctccagattgcactgattccccagactcgcttagaacggatttatcgtcagagcgaa
gaatcaaccatcgtcacattggcaagtcagattcgacaaggcatcttgccagccgacttt
acccagaaaaaagcagaccgctcctactttgaaatcgctagtggccatatcccagctacc
attgagaaaattcttggcgctgccctcagaagtggtattttggctcgcgatattcaggtg
ctagcgcctatgtatcgaggaactgctggtatcgacgccatcaaccaactcatgcaagac
ctgctcaatcctcagcaaaaggggcaagtgagctttgaagcaactcagtgtcactatcga
acaggggacaaggttattcacctagtcaacgacgctgaagtcaatgtctttaatggagac
ctaggctacatcacagacctgattcctggaaaatacaccgagtccaaacaagacgagatt
gtcattgattttgatggcaacgaggtcatctatccacgcaatgaatggtacaagatccgc
ctggcttatgccatgagtattcataagtcgcaggggagtgagtttcccgttgtcatcctg
cccatcaccagtgctagcaagcgcatgctggagcggaatctcatctacacagctatcaca
cgggccaagagcaagctcatccttcttggcgagttacaggcctttgactatgcagtcaag
catatcgggactgctcgcaagacctatctgattgaacgcttcagtgatttaattgaaact
aatattgaagaaagtaaacaagccttctctgaaactgccacagcaagtgactctgaacaa
tcctgcatcctcaccgaggaaaactggtctagcatcccagccatgattgggattacagat
gcagacttaaaagagatttttggaaaatag
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