Streptococcus sp. NPS 308: SNAG_1766
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Entry
SNAG_1766 CDS
T05541
Name
(GenBank) ribonuclease J 1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
strn
Streptococcus sp. NPS 308
Pathway
strn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
strn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SNAG_1766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strn03019
]
SNAG_1766
Messenger RNA biogenesis [BR:
strn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SNAG_1766
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
DUF4453
Motif
Other DBs
NCBI-ProteinID:
BAV80635
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Position
1773834..1775513
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AA seq
559 aa
AA seq
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MAYTLKPEEVGVFAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDYSY
IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL
YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVGEPADLH
RMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRLQ
QATDAAVKTGRKIAVFGRSMEKAIVNGIELGYIKAPKGTFIEPNEIKDYPAGEILILCTG
SQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHGK
INNIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMSNG
DVLALTADSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKSKM
ILSGPDILSRGFVYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRPFLY
ENTEREPIIIPMILTPDEE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcctacactcttaaacctgaagaagtcggcgtttttgccatcggtggtctgggagaa
atcgggaaaaacacttacggaattgaataccaagacgaaattatcatcgtcgatgctggg
attaaattcccagaagatgacttgctgggtatcgactacgttatccctgactactcttac
atcgtggacaatatcgaccgcgtcaaggctgttttgattacacacggacatgaggaccac
atcggtgggattcctttcctgctcaagcaagcaaatgtccctatctacgctgggccactt
gccctggctttgatccgtggaaaactcgaagaacacggcctcttgcgcaacgccaaactt
tacgaaatcaaccacaacactgagttgacctttaaaaacctcaaggcaactttctttaga
accactcactccattccagagcctttggggattgtcattcatactcctcaagggaaaatc
gtctgtacgggtgactttaagtttgactttactccagttggggaacctgcagacttgcac
cggatggctgcccttggtgaagagggtgttctctgtctcctctctgactcgacaaatgca
gaagtgccaacctttaccaactctgaaaaagtcgttggccagtccatcatgaaaatcatt
caaggcattgaaggacgtatcatttttgcatcctttgcctcaaatatcttccgtctccag
caagcaacagatgccgctgttaagactggacgcaagattgcggtctttggtcgttcgatg
gaaaaggccattgtcaacgggatcgagcttggctacatcaaagctcctaagggaaccttt
atcgagccaaatgagatcaaagactaccctgcaggcgagattctaatcctgtgtacaggt
agtcagggtgagccgatggcagccctctctcgtatcgctaatggaactcaccgccaggtg
caactccaacccggcgatactgttatcttctcttctagcccaatccctggaaatacgact
agcgtcaacaaactgattaacatcatttcagaagctggcgtcgaagtcattcacggcaaa
atcaataatatccacacctctggacacggtggtcaacaagagcaaaaactcatgctccgt
ttgatcaagcctaaatacttcatgcctgtccatggcgaataccgcatgcaaaaagtccac
gctggactagcagtggatactggtgttgagaaggacaatatctttatcatgagcaatggt
gatgtgcttgcccttactgctgactcagctcgtatcgcaggtcacttcaatgcccaagac
atttatgtcgatggaaatcgtatcggtgaaatcggtgcagccgtcctcaaagaccgtcgt
gatctatccgaagacggtgtcgttctagcagtcgcaactgttgacttcaagtctaaaatg
atcttgtctggtccagatatcctcagccgaggatttgtctacatgcgagagtctggcgac
ttgattcgccaaagccagcgtatcctcttcaatgccattcgtatcgcattgaaaaacaaa
gatgctagcgtgcaatctgtcaatggtgctattgtcaacgccattcgccccttcctctat
gaaaatactgaacgtgaaccgattatcatcccgatgatcctcacaccagatgaagaataa
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