Streptomyces sp. MOE7: STRMOE7_17690
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Entry
STRMOE7_17690 CDS
T05374
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
stro
Streptomyces sp. MOE7
Pathway
stro03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stro00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
STRMOE7_17690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stro03021
]
STRMOE7_17690
03400 DNA repair and recombination proteins [BR:
stro03400
]
STRMOE7_17690
Enzymes [BR:
stro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
STRMOE7_17690
Transcription machinery [BR:
stro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
STRMOE7_17690
DNA repair and recombination proteins [BR:
stro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
STRMOE7_17690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
ARH91834
LinkDB
All DBs
Position
complement(4006035..4009934)
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITWVDEERRTRDLPSLEAHVSVERQQIEQRRDSDLEARAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWNRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLETFDLEEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTRNSPKGMVLDCIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDEEERKVIGE
GRAFGSVAEAIMAFDARELSLQAKVDIRFPIGTVPPRGWTPPVPEEGEPEWQQGDSFRLR
TTLGRALFNELLPEDYPFVDYSVGKKQLSAIVNDLAERYPKVIVAATLDNLKAAGFHWAT
RSGVTVAVSDIVVPEAKKAIVAGYEAQDEKVQKQYERGLITKDERTQELINIWTKATNEV
AEAMNENFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLS
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLKLRIASKD
AAGVLRKADDVESSVYARMLAEDVVVDGKVVAPANVDLGDVLIDALVNAGVEEVKTRSVL
TCESAVGTCAFCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
LGLPRVVELFEARTPKGVAPISEAAGRVRIEETEKTKKVVVTPDDGSDEMAYGVSKRARL
LVGEGDHVQVGQPMTVGAINPHDVLRILGQRAVQVHLVGEVQKVYNSQGVAIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERTKFESENRRVVAEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgatgagctccggatcggtctggccaccgctgacgacatc
cgtcagtggagccacggcgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
cccgaaaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggtaagtacaagcgcgtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtcactcgcgccaaggtgcgtcgtgagcggatgggtcacatcgagctggccgctcct
gttacccacatctggtacttcaagggcgtgccgagccggctgggctacctgctggacctc
gcgcccaaggacctcgagaaggtcatctacttcgccgcctacatgatcacgtgggtggac
gaggagcgccgtacgcgcgacctgccctcgctggaggcgcacgtctccgtcgagcgtcag
cagatcgagcagcgccgcgactccgacctggaggcccgcgccaagaagctcgagaccgac
ctggccgagctggaggccgagggcgccaaggcggacgtgcgccgcaaggtgcgcgagggt
gccgagcgcgagatgaagcagctgcgcgaccgtgcgcagcgcgagatcgaccgcctcgac
gaggtctggaaccgcttcaagaacctcaaggtccaggacctggagggcgacgagctgctc
taccgcgagctgcgtgaccgcttcggcacgtacttcgacggctccatgggtgccgctgcc
ctgcagaagcgcctggagaccttcgacctcgaggaagaggccgagcgcctccgcgagatc
atccgtaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcc
gccttcctgcagacccgcaacagccccaagggcatggtgctggactgcatcccggtgatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgtgtgatcaaccgcaacaaccgcctcaagcgtctccttgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggtcgcccggtcaccggtcccggtaaccgcccgctgaag
tccctcagcgacatgctgaagggtaagcagggccggttccgtcagaacctgctcggtaag
cgagtcgactactcggcgcgttccgtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggtctgcccaaggccatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagtcggcgaagcgcatggtcgagcgcggccgc
acggtcgtctacgacgtgctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gcgcccaccctgcaccgcctcggcatccaggcattcgagccgcagctggtcgagggcaag
gccattcagattcacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcaccttccgctgtccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagccggccgacggccgtccggtcaccatgccgacccaggac
atggtgctcggtctcttcttcctcaccacggatgaggaggagcgcaaggtcatcggtgag
ggccgtgcgttcggctcggtcgccgaggcgatcatggcgttcgacgcccgcgagctctcg
ctccaggcgaaggtcgacatccgcttcccgatcggcaccgtcccgccgcgtggctggacc
ccgccggttccggaggagggcgagcccgagtggcagcagggtgacagcttccggctgcgg
acgaccctgggccgcgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tactcggtgggcaagaagcagctctccgcgatcgtcaacgacctggccgagcgctacccg
aaggtcatcgtggcggcgacgctcgacaacctgaaggcggccggcttccactgggcgacc
cgttccggcgtcaccgtcgccgtctcggacatcgtcgtgccggaggccaagaaggccatc
gtcgcgggctacgaggcccaggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggacgagcgcactcaggaactgatcaacatctggaccaaggcgaccaacgaggtc
gccgaggcgatgaacgagaacttccccaagacgaaccccatcttcatgatggttgactcg
ggtgcccgaggaaacatgatgcagatgcggcagatcgccggtatgcgtggtctggtgtcg
aacgcgaagaacgagaccatcccgcgtccgatcaaggcctcgttccgcgagggtctgtcc
gtgctggagtacttcatctccacgcacggtgcccgtaagggtctggcggacaccgccctt
cgtaccgccgactccggttacctcacccgtcgtctggtcgacgtctcccaggacgtcatc
attcgcgaggaggactgcggcaccgagcgcggcctcaagctgcggatcgcctcgaaggac
gccgccggtgtcctgcgcaaggcggacgacgtcgagtccagcgtctacgcccgcatgctg
gccgaggacgtcgtcgtcgacggcaaggtcgtcgcgccggcgaacgtcgacctcggtgac
gtgctcatcgacgcgctggtcaacgccggcgtcgaggaggtcaagacccgctcggtcctg
acctgtgagtccgcggtcggtacctgtgccttctgctacggccgctcgctggccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggcacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacc
ctgggtctgccgcgtgtcgtcgagctcttcgaggcccgtacgcccaagggtgtcgccccg
atctcggaggcggccggccgcgtccggatcgaggagaccgagaagaccaagaaggtcgtc
gtcaccccggacgacggcagcgacgagatggcgtacggcgtctccaagcgtgcccgtctc
ctggtgggcgagggcgatcacgtccaggtcggtcagccgatgaccgtgggtgcgatcaac
ccgcacgacgtgctgcggatcctcggccagcgtgccgtccaggtccacctggtcggcgag
gtccagaaggtctacaacagccagggcgtggcgatccacgacaagcacatcgagatcatc
atccggcagatgctgcgccgcgtgacgatcatcgagtccggcgacgcggagctgctgccg
ggcgagctcgtggagcgtacgaagttcgagagcgagaaccgtcgcgtcgtggcggaaggc
ggccacccggcctccggccgtccgcagctgatgggtatcaccaaggcttcgctggccacc
gagtcctggctgtcggcggcgtccttccaggagacgaccagggtcctgaccgacgcggcg
atcaacgccaagtcggactccctgatcggcctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacgggcctgtcccgctaccgcaacatccgggtcgagcccaccgaggag
gccaaggccgcgatgtactcggccgtcggttacgacgacatcgactactcgcccttcggc
accggctccggccaggcggtcccgctggaggactacgactacggcccgtacaaccagtaa
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integrated database retrieval system
