Streptomyces sp. MOE7: STRMOE7_18305
Help
Entry
STRMOE7_18305 CDS
T05374
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
stro
Streptomyces sp. MOE7
Brite
KEGG Orthology (KO) [BR:
stro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stro03016
]
STRMOE7_18305
Enzymes [BR:
stro01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
STRMOE7_18305
Transfer RNA biogenesis [BR:
stro03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
STRMOE7_18305
Prokaryotic type
tRNA splicing ligases
STRMOE7_18305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF7857
Motif
Other DBs
NCBI-ProteinID:
ARH91934
LinkDB
All DBs
Position
complement(4137154..4138347)
Genome browser
AA seq
397 aa
AA seq
DB search
MSYVEVPGAQVPIRMWTDPATVEDVAMQQLRNVATLPWIKGLAVMPDVHYGKGATVGSVI
AMRGAVCPAAVGVDIGCGMSAVKTSLTANDLPGDLSRLRSKIEQVLPVGRGMHDDPVDPG
RLHGVPTAGWDDFWTRFDGVAEAVRFRRERAVKQMGSLGGGNHFWEFCVDADQSVWIMLH
SGSRNIGKELAEYHMGVAQKLPQNQGLVDRDLAVFIADTPQMAAYRNDLFWAQEYAKHNR
EIMMALTQDVIRREFKKAKVTFDQVISCHHNYVAEERYEGMDLLVTRKGAIRAGSGEYGI
IPGSMGTGSYIVKGLGNAASFNSASHGAGRKMSRNAAKKRFSTRDLEEQTRGVECRKDSG
VIDEIPGAYKPIEKVIEQQRDLVEVVAHLKQVVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgtcgaggtgcccggcgcgcaggtaccgatccggatgtggacggatccggcc
acggtcgaggacgtcgccatgcagcagctgcgcaatgtcgccaccctcccgtggatcaag
ggcctggccgtgatgccggacgtgcactacggcaagggcgccacggtcggctcggtgatc
gcgatgcgcggcgcggtctgcccggcggcggtcggcgtcgacatcggctgcggaatgagc
gcggtgaagacctcgctgaccgccaacgacctgcccggcgacctctcccggctccgctcg
aagatcgagcaggtgctcccggtggggcgggggatgcacgacgatccggtcgaccccggg
cggctgcacggcgtcccgacggccggctgggacgacttctggacgcggttcgacggggtc
gcggaagcggtcaggttccgccgggagcgggccgtgaagcagatgggctcgctcggtggc
ggcaaccacttctgggaattctgcgtcgacgccgaccagtccgtgtggatcatgctgcac
tccgggtcgcgcaacatcggcaaggagctggccgagtaccacatgggcgtggcccagaag
ctgccgcagaaccagggcctggtcgaccgcgacctcgccgtcttcatcgcggacaccccg
cagatggcggcctaccgcaacgacctgttctgggcccaggagtacgccaagcacaaccgc
gagatcatgatggccctgacccaggacgtgatccgccgggagttcaagaaggccaaggtc
accttcgatcaggtcatctcctgccaccacaactacgtggcggaggagcggtacgagggc
atggacctcctggtgacccgtaagggcgccatccgggcgggcagcggcgagtacggcatc
atccccggctcgatgggcaccggctcgtacatcgtcaagggcctcgggaacgccgcgtcc
ttcaactcggcctcgcacggtgccggccgcaagatgagccggaacgccgccaagaagcgc
ttctcgacgcgtgacctggaggagcagacgcggggtgtggagtgccggaaggactccggc
gtgatcgacgagatcccgggcgcctacaagccgatcgagaaggtcatcgagcagcagcgg
gacctggtggaggtcgtcgcccacctcaagcaggtcgtctgcgtgaagggctag
DBGET
integrated database retrieval system
