Streptomyces sp. MOE7: STRMOE7_28340
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Entry
STRMOE7_28340 CDS
T05374
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
stro
Streptomyces sp. MOE7
Pathway
stro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STRMOE7_28340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stro03019
]
STRMOE7_28340
03400 DNA repair and recombination proteins [BR:
stro03400
]
STRMOE7_28340
Enzymes [BR:
stro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STRMOE7_28340
Messenger RNA biogenesis [BR:
stro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
STRMOE7_28340
DNA repair and recombination proteins [BR:
stro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
STRMOE7_28340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
AAA_30
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
ARH93551
UniProt:
A0A1W5XUJ8
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All DBs
Position
complement(6387317..6389482)
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AA seq
721 aa
AA seq
DB search
MSNEELRAAADAVLSRLVGDPGGEARLREDQWRAIEALVADHRRALVVQRTGWGKSAVYF
VATALLRERGSGPTVIVSPLLALMRNQVDAAARAGIRARTINSANTEEWDTVQAEVAAGE
VDVLLVSPERLNNPDFRDQVLPKLAAATGLLVVDEAHCISDWGHDFRPDYRRLRTMLADL
PPDVPVLATTATANARVTADVAEQLGTGEGAAETLVLRGALDRESLSLGVLPLPDAAHRL
AWLADHLHELPGSGIIYTLTVATAEEVTAFLRQRGHTVASYTGKTENADRQQAEDDLLAN
RVKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVKHAEVLLLPGREDE
AIWKYFASLAFPPEAQVRETLDVLAAAGRPVSLPALEPQVELRRSRLEIMLKVLDVDGAV
QRVKGGWIATGRPWTYDTERYAWVTRQREAEQQAMREYATTTGCRMEFLRRQLDDEAAVA
CGRCDNCAGARFGTEVSAASLDAARGELGRPGVEVEPRRMWPTGLPTVGIDLKGRIPAGE
LAATGRALGRLSDIGWGNRLRPMLAPQAPDGPIPDDVASAVVTVLADWAKGPGGWASGAA
DAPHRPVGVVCLSSRSRPQLIRSLAERIAAVGQMPFLGTVTSADDGAEGRIPRSNSAQRL
RALHSSLGVPPELAEALASAGGPVLLVDDYADTGWTLAVAARLLRKAGAEGVFPLVLAVQ
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgaagagctgcgtgccgcagccgatgccgtcctgtcgcgcctcgtcggtgat
cccggcggcgaggcccggctgcgcgaggaccagtggcgggcgatcgaggcgctggtcgcc
gaccaccgtcgcgcgctggtcgtgcagcgcacgggctggggcaagtccgcggtctatttc
gtcgcgacggcgctgctgcgggagcgcggcagcggaccgacggtgattgtctcgccgctg
ctcgcgctcatgcgcaaccaggtcgacgccgccgcgcgggccgggatccgcgcgcgcacg
atcaactctgccaacaccgaggagtgggacaccgtccaggccgaggtggcggcgggcgag
gtggacgtcctgctggtgagccccgagcggctgaacaatcctgatttccgtgatcaggtg
ctgcccaagctcgcggcggcgaccggcctgctggtggtcgacgaggcacactgcatctcc
gactggggccatgacttccggccggactaccggcggctgcgcacgatgctcgccgacctc
ccgccggacgtgcccgtgctcgccacgaccgccacggccaacgcccgggtgaccgccgat
gtggcggagcagctggggacgggcgagggtgccgccgagacgctggtgctgcgcggtgcg
ctcgaccgggagagcctcagcctgggcgtgctgccgctgccggatgccgcgcaccgtctc
gcctggctcgcggatcatctgcacgagctgccgggctccgggatcatctacacgctcacc
gtcgccaccgccgaggaggtcaccgcgttccttcgccagcggggtcacacggtggcgtcg
tacacgggcaagacggagaacgccgaccgtcagcaggccgaggacgatctgctcgccaac
cgggtcaaggcgctggtggcgacctccgcgctgggcatgggcttcgacaagcccgacctg
ggcttcgtggtgcacctgggttcgccgtcctcccccatcgcgtactaccagcaggtgggc
cgcgcgggccgtggcgtcaagcacgccgaggtgctgctgctgcccggccgtgaggacgag
gcgatctggaagtacttcgcctcgctggcgttcccgcccgaggcgcaggtacgggagacc
ctggacgtcctggcagccgccggccgaccggtgtcactgcccgccctggagccccaggtc
gaactgcgccggtcccggctggagatcatgctcaaggtgctcgatgtggacggcgccgtg
cagcgcgtcaagggcggctggatcgcgacgggccggccctggacgtacgacaccgagcgc
tatgcctgggtgacccgtcagcgcgaggccgagcagcaggcgatgcgggagtacgccacg
acgaccggctgccggatggagttcctgcgccggcagctcgacgacgaggcggcggtggcg
tgcggtcgctgcgacaactgcgccggtgcgcggttcggcaccgaggtctccgccgcgtcg
ctggacgcggcgcgcggtgagctggggcgcccgggggtggaggtggagccgaggcggatg
tggcccacggggctgccgaccgtcggcatcgacctcaaggggcgcattccggcgggcgag
ctggcggcgaccggccgggccctggggcggctctcggacatcgggtggggcaatcggctg
cggccgatgctcgcaccgcaggcacctgatgggccgattccggacgatgtggcgtccgcg
gtggtcacggtgctcgccgactgggccaaggggcccggtggttgggcgtcgggcgcggcg
gacgcaccgcaccgcccggtgggcgtggtctgtctctcctcgcgcagccggccgcagctg
atcaggtcgctcgccgagcggatcgccgcggtcggccaaatgccgttcctgggcacggtg
acctcggcggacgacggtgccgagggccggattccgcgcagcaacagcgcccagcgcctg
cgagccctgcacagttcgctcggcgtaccgccggagctggccgaggcgttggcgtccgcc
ggcggcccggtgctcctggtggacgattacgccgacaccggctggaccctggcggtggcc
gcccggctgctgcgcaaggccggcgcggagggggtgtttccgctggtcctcgccgtacag
gggtag
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