Streptomyces sp. PAMC 26508: F750_0018
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Entry
F750_0018 CDS
T02619
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
strp
Streptomyces sp. PAMC 26508
Brite
KEGG Orthology (KO) [BR:
strp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strp03400
]
F750_0018 (sbcC)
DNA repair and recombination proteins [BR:
strp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F750_0018 (sbcC)
Archaeal homologous recombinant proteins
F750_0018 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
PhdYeFM_antitox
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AGJ52529
LinkDB
All DBs
Position
complement(22305..25310)
Genome browser
AA seq
1001 aa
AA seq
DB search
MYLHHLTVQAFGPFARTESVDFDTLTSNGLFLLRGDTGAGKTSILDAVCFALYGTVPGIR
PTHRLRSDHAPTDTRTHVILEFTAAGRRLKITRKPKQTYPSKRAKTGTATAEATVELHQW
TDTDGDQRWEPVSANHQDTAREIEAALGLSKEQFCQVVLLPQGDFATFLRSDAKDRTVLL
RRLFDTGRFQELQAWLTNRSKATKKDLDDVTATLQHLSERIHQEAGPLLDQDATSTGEAA
LPDTQDPAGALPRAQHLHILAVNAHTEAVTDEEHSDTEHQNAKTEHQRTHELAGRQTQHA
QAQARRTALDDKAAHHPQLRNELDNGRRAERLRPLLEAVKHTSHALETATTAEDQARAQL
PEEDRRTGIPQLQAALEQHHADRGHVEGLLPDEQRHAQLGVQISELSTEAEQAQADLEEA
GQWLAAWPALEAEHASLLSDMTKAADQVPQHEQDIQTLTTHLKAARLRDTLTTELDRAAQ
AETDRATEALEAKKRWLDLRERRLDGMAGELAAELTDEAPCPVCGSPEHPHAAQLLPDQP
TRQEEEKARTLHEQADTLHTQASRHRGELATQHAEAAGAAGPAPSVELKAQLKTAQAAHR
AACDAASALPAAQETLTHLRTEHDTRTQQRQQAQDRVTECLARTKTLAQQQSALADTLAA
ARGTATTLDERITEIIGTAKHLSTAIDAAQKAADATARHHDATTTVTTTARDAGFPTLEE
AAAALKDPQLLDQWGKDDAVVTDLLKTPNLQEAGLQPPADLPAAAQALREAENRMKETAA
ARQQAAHRVTALTELISTLTARLNDLEPLQARHALADRLAGIACATTTANTLSMELEAYV
LAARLEEIAEAANIRLQAMTSERYLLQHTADKDAGRRGRLKSGLGLRILDTWTGTERETS
TLSGGETFTASLALALGLADVVTQEASGRPLGTLFIDEGFGTLDEQNLQEVMDVLDQLRA
GNRAVGIVSHVAELSRRIPSQLNVLKHRNGSTLRPLISTDL
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtacctccaccacctgaccgtccaggcattcggacccttcgcccgcacagaatccgtc
gacttcgacaccctgaccagcaacggcctgttcctcctgcgcggagacaccggcgcgggc
aagaccagcatcctggacgccgtctgcttcgccctctacggcaccgtgcccggcatccgc
cccacccaccgcctgcgcagcgaccacgcccccaccgacacacgcacccacgtcatcctg
gagttcaccgccgcaggccgacgcctcaagatcacccgaaagccaaagcagacctacccc
agcaaacgtgccaagaccggaaccgccaccgccgaagcaaccgtcgaactgcaccagtgg
accgacaccgacggcgaccagcgatgggagccggtcagcgccaaccaccaggacaccgcc
agagagatcgaagcagccctgggactgtccaaagaacagttctgccaggtcgtcctcctg
ccacaaggcgacttcgcgaccttcctgcggtccgacgccaaggaccgcacggtgctgctg
cgccgcctcttcgacaccggacgcttccaggaactccaggcgtggctcaccaaccgaagc
aaagccaccaagaaggacctcgacgacgtcacagccaccctgcagcacctcagcgaacgc
atccaccaggaagccggccccctcctcgaccaggacgccaccagcaccggcgaggccgcc
ctgcccgacacccaggaccccgccggcgccctgccccgggcccagcacctgcacatcctc
gccgtcaacgcccacaccgaggctgtgaccgacgaggaacacagcgacaccgaacaccag
aacgccaagaccgaacaccagcgcacccacgagctcgcaggccgacaaacccagcacgcc
caagcacaagcgcgccgtacagcactcgacgacaaggccgcccaccacccacaactgcgc
aacgaactcgacaacggccggcgcgccgaacggctgcgccccctcctggaagccgtgaag
cacacctcacatgccctggaaacggccacgacagccgaagaccaggcccgcgcccagctg
cccgaagaagaccgtcgcaccggcatcccccagctgcaggctgccctggaacagcaccac
gccgacaggggtcacgtcgaagggctgctgcccgacgagcagcgccacgcacagctcggc
gtccagatttccgagctcagcaccgaggcagagcaggcgcaagccgaccttgaggaagcc
gggcagtggctggccgcatggcctgccctggaggccgaacacgccagcctcctcagcgac
atgaccaaagccgccgaccaagtacctcaacacgagcaggacatccagacactcaccacc
cacctcaaagccgcgcgcctccgcgacaccctcaccaccgaactcgaccgcgccgcacaa
gcggaaaccgaccgtgccaccgaagccctcgaagctaaaaagcggtggctcgacctgcgt
gaacgccgcctggacggcatggccggggagctggccgcagaactcaccgacgaagcgccg
tgcccggtctgcggctcacccgaacacccgcacgcggcccaactccttcccgaccagccc
acacgccaggaagaggagaaggcccgcactctccacgaacaggccgacacgctgcacacg
caagccagccgccaccggggcgagctcgccacccagcacgccgaagcagccggagcagcg
ggccccgcccccagcgtcgagctcaaggctcagctcaaaacggcccaggcagcccaccgg
gccgcatgcgacgccgccagcgcactgcccgcagcccaagagaccttgacccacctccgc
acagagcacgacacccgcacccagcagcgccaacaagcccaggaccgcgtgaccgaatgc
ctggcgcgcaccaaaaccctggcccagcagcagagcgctctcgccgacaccctggccgcg
gcacgcggcaccgctaccaccctcgacgagcgcatcaccgaaatcatcggcaccgccaaa
cacctgtccaccgcgatcgacgccgcccagaaggcagccgacgcaaccgcccgccaccat
gacgccacgaccaccgtcaccaccaccgcccgggacgccggattcccgaccctcgaggaa
gcagctgccgccctcaaggacccgcagctcctcgaccagtggggcaaggatgacgccgtc
gtcaccgacctcctgaaaaccccgaacctgcaggaagccggcctccagccccccgcagac
ctccccgccgccgcccaagccctgcgcgaggccgaaaaccgaatgaaggagaccgcggcc
gcccgccagcaggccgctcaccgggtcaccgcactgactgaactgatctccaccctcaca
gcccgcctcaacgacctggaacccctccaagcccgccacgccctggccgaccgcctggcc
ggcatcgcctgcgccaccaccaccgccaacaccctcagcatggaactcgaggcctacgtc
ctggccgctcgactcgaagagatcgccgaggcagccaacatccggctccaggccatgacc
tcggagcgctacctccttcagcacaccgcagacaaggatgcaggccgacgtggacgcctc
aagtccggcctgggactgcgaatcctcgacacgtggactggcaccgaacgcgaaacctcc
accctctccggcggcgaaaccttcaccgcctccctcgccctcgcgctcggcctggccgac
gtcgtcacccaggaagccagcggccgccctctgggaaccctgttcatcgatgaaggcttc
ggcaccctcgacgaacagaacctgcaggaagtcatggacgtcctggaccaactacgcgcc
gggaaccgcgccgtaggcatcgtcagtcacgtcgccgaactgagccgccgcatcccgagc
cagctcaacgtgctgaaacaccgcaacggctccaccctccgcccgctcatcagcaccgat
ctgtaa
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