Streptomyces sp. PAMC 26508: F750_1925
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Entry
F750_1925 CDS
T02619
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
strp
Streptomyces sp. PAMC 26508
Pathway
strp03030
DNA replication
strp03430
Mismatch repair
strp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
strp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F750_1925
03430 Mismatch repair
F750_1925
03440 Homologous recombination
F750_1925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
strp03032
]
F750_1925
03400 DNA repair and recombination proteins [BR:
strp03400
]
F750_1925
Enzymes [BR:
strp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F750_1925
DNA replication proteins [BR:
strp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F750_1925
DNA repair and recombination proteins [BR:
strp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F750_1925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
AGJ54420
LinkDB
All DBs
Position
complement(1981562..1985101)
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFEACNDMGMSHIAMTDHGNLHGAYDFFHSAKKA
GVTPIIGIEAYVAPESRKHKRKVQWGQPHQKRDDVSGSGGYTHKTIWAANSTGLHNLFKL
SSDAYAEGWLQKWPRMDKETISQWSEGLIASTGCPSGEVQTRLRLGQFDEAVQAASDYKD
IFGEGRYFLELMDHGIEIERRVRDGLLEIGRKLDIPPLVTNDSHYTYANEATAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKTTDEMYGVDSSDAWQEGCANTLLVAQQIDTTGMFEKRD
LMPKFDIPEGFTEITWFQEEVRAGMGRRYPGGVPEDRQKQAEYEMDIIIQMGFPGYFLVV
ADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPITHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLNGITDPKHPRYSEAGEIRGMYENEPDVRKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIVDHAPIWVRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAIKMVKA
NKGVDLEMLSLPLDDPKTYELLCRGDTLGVFQFDGGPMRSLLRQMQPDNFEDISAVSALY
RPGPMGMNSHTNYAERKNARQEITPIHPELEEPLKEVLGLTYGLIVYQEQVQKAAQIVAG
YSLGEADILRRVMGKKKADELAKNFVLFEAGAKKNGFSDAAIKALWDVLVPFAGYAFNKA
HSSAYGLVTYWTAYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
ESNFAAQGDDVILFGLTAVRNVGSNVVDSIIRCRKAKGKYSTFPDFLDKVEAVVCNKRTV
ESLIKAGAFDEMGHTRKGLVAHHEPMIDNVVQVKRKEAEGQFDLFGGMGDESSDEPGFGL
DVEFSDIEWEKSYLLAQEREMLGLYVSDHPLFGLEHVLSDKSDAAISQLTGGEHADGAIV
TVGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDTVVFVKGRL
DKREDVPRLVAMEMQVPDISNAGSNAPVVLTIPTVRVTPPMVSRLGEVLSHHRGDTEVRI
RLQGPRKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaagccgcccttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctcaaggacatgttcgaggcgtgcaacgacatgggcatgtcgcacatcgcg
atgaccgaccacggcaacctccacggggcgtacgacttcttccactccgcgaagaaggcc
ggggtgacgccgatcatcgggatcgaggcctacgtcgccccggagtcccgcaagcacaag
cgcaaggtccagtgggggcagccgcaccagaagcgggacgacgtctcgggttccggcggt
tacacccacaagacgatctgggcggccaacagcaccgggctgcacaacctcttcaagctc
tcctcggacgcgtacgccgagggctggctgcagaagtggccccgcatggacaaggagacc
atctcccagtggtccgaggggctcatcgcctccaccggctgcccgtccggcgaggtgcag
acccggctgcggctcggtcagttcgacgaggccgtccaggcggcctccgactacaaggac
atcttcggtgagggccggtacttcctggagctgatggaccacggcatcgagatcgagcgc
cgggtccgcgacgggctcctggagatcggccggaagctggacatcccgccgctcgtgacg
aacgactcgcactacacgtacgccaacgaggcgaccgcgcacgacgccctgctctgcatc
cagaccggcaagaacctctccgaccccgaccgcttccgcttcgacgggacgggctactac
ctcaagacgacggacgagatgtacggcgtcgactcctcggacgcctggcaggagggctgc
gccaacaccctcctcgtcgcgcagcagatcgacacgaccggcatgttcgagaagcgcgac
ctgatgccgaagttcgacatcccggaaggcttcacggagatcacctggttccaggaggag
gtccgggccggcatgggccgccgctaccccggtggcgtccccgaggaccggcagaagcag
gccgagtacgagatggacatcatcatccagatggggttcccggggtacttcctcgtcgtc
gccgacttcatcatgtgggccaagaacaacggcatcgcggtgggtcccgggcgtggttcc
gccgccggttcgatcgtcgcctacgccatgggcatcaccgacctcgacccgatcacccac
ggactgatcttcgagcgcttcctcaaccccgagcgcgtctccatgcccgacgtcgacatc
gacttcgacgagcgccggcgcgtcgaggtcatccggtacgtcaccgagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggcaagatcaaggccaagaacgcgatcaaggac
tccgcgcgcgtcctgggctacccctacgcgatgggcgaccgtctcaccaaggccatgccc
gccgacgtcctcggcaagggcatcgacctcaacggcatcaccgacccgaagcacccgcgc
tacagcgaggcgggcgagatccgggggatgtacgagaacgagcccgacgtccggaaggtc
atcgacaccgccaagggcgtggagggcctcgtccggcagatgggtgtgcacgcggccggc
gtgatcatgtccagcgagccgatcgtcgaccacgcgcccatctgggtgcggcacaccgac
ggcgtgacgatcacgcagtgggactacccccagtgcgagtcgctcggcctgctcaagatg
gacttcctgggcctgcgcaacctgacgatcatggacgacgccatcaagatggtgaaggcc
aacaagggcgtcgacctggagatgctctccctgcccctggacgaccccaagacctacgag
ctgctgtgccgcggtgacacgctcggggtgttccagttcgacggcggccccatgcggtcg
ctgctgcgccagatgcagcccgacaacttcgaggacatctccgccgtctcggccctctac
cggccgggcccgatgggcatgaactcgcacacgaactacgccgagcgcaagaacgcccgg
caggagatcaccccgatccacccggagctggaggagcccctcaaggaggtcctcggcctc
acctacggcctgatcgtgtaccaggagcaggtgcagaaggccgcccagatcgtcgccggc
tactcgctcggcgaggccgacatcctgcgccgtgtgatgggcaagaagaaggccgacgag
ctggcgaagaacttcgtcctcttcgaggccggagccaagaagaacggcttctccgacgcg
gcgatcaaggccctgtgggacgtcctggtcccgttcgccggatacgccttcaacaaggcg
cactcctcggcgtacggcctggtcacctactggaccgcctacctcaaggcgaactacccg
gccgagtacatggcggccctgctgacgtccgtcaaggacgacaaggacaagtccgcggtc
tacctcaacgagtgccggcgcatgggcatcaaggtcctcccgccgaacgtcaacgagtcc
gagtcgaacttcgccgcccagggtgacgacgtgatcctcttcggactgaccgccgtccgc
aacgtcgggtcgaacgtggtcgactcgatcatcaggtgccgcaaggcgaaggggaagtac
tccaccttccccgacttcctcgacaaggtcgaggcggtcgtctgcaacaagcggaccgtc
gagtcgctcatcaaggccggtgcgttcgacgagatggggcacacccgcaagggactcgtc
gcccaccacgagccgatgatcgacaacgtggtgcaggtcaagcgcaaggaggccgaggga
cagttcgacctcttcggcggcatgggcgacgagtcgagcgacgagcccggcttcggcctg
gacgtcgagttctccgacatcgagtgggagaagtcctacctgctcgcccaggaacgcgag
atgctcggcctctacgtctccgaccacccgctcttcggcctggagcacgtgctgtccgac
aagtcggacgcggcgatctcccagctcaccgggggcgagcacgcggacggcgcgatcgtc
accgtgggcggcatcatctccggcctgcagcgcaagatgaccaagcagggcaacgcctgg
gccatcgccaccgtggaggacctcgcgggctccatcgagtgcatgttcttccccgcgacc
taccagctggtctccacccagctcgtcgaggacaccgtcgtcttcgtcaagggacgcctc
gacaagcgcgaggacgtgccgcgcctggtcgccatggagatgcaggtccccgacatctcg
aacgccgggtcgaacgcacccgtcgtcctgaccatccccacggtcagggtcaccccgccc
atggtcagcaggctcggcgaggtgctcagccaccaccgcggcgacaccgaggtgcgcatc
aggctccagggcccccgcaagaccaccgtgctccggctggaccggcaccgcgtcaagccg
gaccccgccctcttcggcgacctcaaggtgctgctcggcccgtcctgcctggccggctga
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