Streptomyces sp. PAMC 26508: F750_4192
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Entry
F750_4192 CDS
T02619
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
strp
Streptomyces sp. PAMC 26508
Pathway
strp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
strp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F750_4192 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strp03019
]
F750_4192 (recQ)
03400 DNA repair and recombination proteins [BR:
strp03400
]
F750_4192 (recQ)
Enzymes [BR:
strp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F750_4192 (recQ)
Messenger RNA biogenesis [BR:
strp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F750_4192 (recQ)
DNA repair and recombination proteins [BR:
strp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F750_4192 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AGJ56637
LinkDB
All DBs
Position
4371664..4373673
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AA seq
669 aa
AA seq
DB search
MSVTTESAAQQTLHKVFGYEAFRGEQGAVIEHVVGGGDAVVLMPTGGGKSLCYQIPALVR
PGTGIVISPLIALMQDQVDALRALGVRAGFMNSTQDFDERRSMEAQFVAGELDLLYLAPE
RLRLDSTLSLLARGEISVFAIDEAHCVAQWGHDFRPDYLALSVLGERWPDVPRIALTATA
TEATHKEITQRLGMPEAKHFVASFDRPNIQYRIVGKSDPKKQLLTFLKEEHAGDAGIVYC
LSRNSTEKTAEYLSRNGVEAVPYHAGLDAGTRAAHQSRFLREEGLVVVATIAFGMGIDKP
DVRFVAHLDLPKSVEGYYQETGRAGRDGAPSTAWMAYGLQDVVQQRKLIQGGEGDEAFRR
RAASHLDSMLALCETVQCRRAQLLTYFGQEPGEQACGNCDTCLTPPETWDGTVVAQKLLS
TVVRLKRERNQKFGAGQIIDILLGRRTAKVIQFDHDQLSVFGIGEELAEAEWRGVVRQLL
AQGLLAVEGEYGTLVLTEASGTVLGREREVMLRKEPKRPTTRSSSGGERRSKAAATAELP
AEAVPVFEALRAWRGAQAKELGLPAYVIFHDATLREIAALRPGSLAELGGVSGLGEKKLA
TYGEGVLEVLAGLRDTAPPAAAPETSSPDASQSPAPVRASEPAPAARPAARVPDPDPEFG
WDEEPPEFD
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgacgaccgagagcgctgcgcagcagacgctgcacaaggtcttcgggtacgag
gcgttccgcggcgagcagggcgcggtgatcgagcacgtcgtcgggggcggcgacgcggtc
gtcctcatgcccacgggtggcggcaagtccctctgctaccagatccccgccctggtcagg
ccgggtaccggcatcgtgatctccccgctgatcgccctcatgcaggaccaggtggacgct
ctgcgcgccctcggtgtccgtgccggcttcatgaactccacgcaggacttcgacgagcgc
cgctcgatggaggcccagttcgtcgccggtgagctcgacctgctgtacctcgcccccgag
cggctgcgcctcgactcgacgctctccctgctcgcccggggtgagatctccgtcttcgcc
atcgacgaggcccactgcgtcgcccagtggggccacgacttccgccccgactacctggcc
ctgtccgtgctcggtgagcgctggcccgacgtgccccgtatcgcgctgacggccacggcg
accgaggccacgcacaaggagatcacccagcggctcggtatgcccgaggccaagcacttc
gtggccagcttcgaccggccgaacatccagtaccgcatcgtggggaagtccgacccgaag
aagcagctgctcaccttcctgaaggaggagcacgcgggggacgcgggcatcgtctactgc
ctctcacgcaactccaccgagaagaccgccgagtacctctcccgcaacggcgtcgaggcc
gtgccgtaccacgccggtctggacgccgggacgcgcgccgcccaccagtcacgcttcctg
cgcgaggagggtctggtcgtcgtcgcgaccatcgccttcggcatgggcatcgacaagccc
gacgtgcgcttcgtcgcccacctggacctgcccaagtccgtcgaggggtactaccaggag
accggccgcgcggggcgtgacggagcgccgtcgacggcctggatggcgtacggactccag
gacgtcgtccagcagcgcaagctgatccagggcggcgagggcgacgaggcgttccggcgt
cgcgccgcctcgcacctcgactcgatgctggcgctctgcgagaccgtgcagtgccgccgg
gcccagctcctgacgtacttcggccaggagcccggcgagcaggcctgcggcaactgcgac
acctgcctcaccccgcccgagacctgggacggcacggtggtcgcccagaagctgctgtcc
accgtggtccggctgaagcgggagcgtaaccagaagttcggggccgggcagatcatcgac
atcctgctgggccgcaggacggccaaggtcatccagttcgaccacgaccagctctcggtc
ttcggcatcggcgaggagctggccgaggcggagtggcggggcgtggtgcgccagctgctg
gcccaggggctgctcgccgtagagggcgagtacggcacgctggtgctgacggaggcgagc
ggcaccgtgctcggcagggagcgcgaggtgatgctccgcaaggagccgaagcggcccacg
acccggtcgtcctcgggcggggagcgcaggagcaaggccgcggcgaccgcggagctgccg
gcggaggccgtaccggtcttcgaggcgctgcgcgcctggcgcggtgcccaggccaaggag
ctgggcctcccggcgtatgtgatcttccacgacgcgacgctgcgggagatcgccgcactg
cggccgggttccctcgcggagctgggaggcgtcagcgggctcggcgagaagaagctggcg
acgtacggcgaaggagtgctggaggtgctggccgggctgagggacacggccccgccggcc
gccgcgccggagacgtcctcgccggatgcttcgcagagccccgcgccggtccgggcgtcc
gagccggcgccggcggcccggcccgccgcccgggtcccggacccggacccggagttcggc
tgggacgaggagcccccggagttcgactga
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