KEGG   Streptomyces sp. PAMC 26508: F750_5099
Entry
F750_5099         CDS       T02619                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
strp  Streptomyces sp. PAMC 26508
Brite
KEGG Orthology (KO) [BR:strp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:strp03032]
    F750_5099
   03036 Chromosome and associated proteins [BR:strp03036]
    F750_5099
   03400 DNA repair and recombination proteins [BR:strp03400]
    F750_5099
DNA replication proteins [BR:strp03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    F750_5099
Chromosome and associated proteins [BR:strp03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    F750_5099
DNA repair and recombination proteins [BR:strp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      F750_5099
SSDB
Motif
Pfam: Bac_DNA_binding HC2
Other DBs
NCBI-ProteinID: AGJ57532
LinkDB
Position
5304790..5305446
AA seq 218 aa
MNKAQLVEAIADKVGGRQQAADAVDVVLDAIVRAVVAGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKGGEVSVKKAPKGSLSGGSSTRTTA
KAAAKKATAKKATAKKSTAAAKKTTAAKKTTAKKTTAAAAKKTTAAAKKATPAKKATATK
KTVAAKTAPAKKTTAKKAPAKKTTARKTTAKKVTARKK
NT seq 657 nt   +upstreamnt  +downstreamnt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtcggaggccgccagcaggcc
gcggacgccgtcgacgtggttctcgacgccatcgtccgcgcggtcgtcgccggggaccgt
gtctcggtcacaggcttcggctcgttcgagaaggtcgaccgtcccgcccggtacgcccgc
aacccccagaccggtgagcgcgtgcgggtcaagaagacctccgtgccccgtttccgcgcg
ggacagggcttcaaggacctggtgagcggctccaagaagctccccaagggcggcgaggtc
tcggtcaagaaggcgcccaagggcagcctctcgggcggttcttccacccgcaccacggcg
aaggcggccgccaagaaggccacggccaagaaggccaccgccaagaagtccacggcggct
gcgaagaagaccaccgccgcgaagaagaccacggccaagaagaccaccgccgcggccgcg
aagaagaccacggcggcggcgaagaaggcgaccccggcgaagaaggcgacggccacgaag
aagaccgtcgcggccaagacggcgcccgccaagaagaccacggcgaagaaggcgcccgcg
aagaagaccacggcacgcaagaccacagccaagaaggtcaccgcacgcaagaagtga

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