Streptomyces sp. PAMC 26508: F750_6585
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Entry
F750_6585 CDS
T02619
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
strp
Streptomyces sp. PAMC 26508
Pathway
strp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
strp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F750_6585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strp03400
]
F750_6585
DNA repair and recombination proteins [BR:
strp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F750_6585
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F750_6585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
ABC_tran
AAA_21
AAA_29
DnaJ_CXXCXGXG
SMC_N
nSTAND1
AAA_16
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AGJ59010
LinkDB
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Position
complement(7023989..7026352)
Genome browser
AA seq
787 aa
AA seq
DB search
MDVDIPRDTLTVFTGVSGSGKSSLAFGTIYAEAQRRYFESVAPYARRLIHQVGAPDVGEI
TGLPPAVSLEQRRSAPGARSSVGTVTTLSNSLRMLLSRAGDYPPGAERLDSDAFSPNTAA
GACPECHGLGLIHRTTEELLVPDPSLSIRDGAIAAWPGAWQGKNLRDVLDALGYDVERPW
RELDTADREWILFTDEQPVVTVHPVRDAGRIQRPYQGTYMSARRHVMHTFADSRSRTLRA
KAERFLTSAPCPVCGGGRLRREALAVTFAGRTIAELVALPLTTLTEVLLESGGGSDTARV
LTADLLARIEPVTELGLGYLSLDRTAPTLSSGELQRLRLATQLRSGLFGVVYVLDEPSAG
LHPADTESLLGVLGRLREAGNSVFVVEHQMDVVRRADWLVDVGPLAGEHGGRVLHSGPPA
GLAGVDGSATRRFLFDEDPAPAREPRVPTGWITLGGVDLHNVRGVDATFPLGVLTAVTGV
SGSGKSTLVGQVLAGVLADRRPAESADAPAVPVTRGCASAEGLDAVDRLVQVDQRPIGRT
PRSNLATYTGLFDVVRKLFAETETARARKYRAGRFSFNVAGGRCETCQGEGFVSVELLFL
PSTYAPCPDCHGARYNPATLEVTLRGLTIAEVLDLTVEAAAGFLAGTPAAERSLRALLDV
GLGYLRLGQPATELSGGEAQRIKLATELQRARRGHTLYLLDEPTTGLHPADVEVLMRQLH
GLVDAGNSVVVVEHDMTVVAGADRVVDMGPGGGDGGGRIVATGTPREVARAAGSRTAAYL
AKALRPG
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
gtggacgtcgacatcccgcgcgacaccctcacggtgttcaccggcgtctcgggctcggga
aagtcctccctggccttcgggacgatctacgccgaggcccagcgccgctacttcgagtcc
gtcgcgccctacgcacgccggctgatccatcaggtcggggcacccgacgtcggcgagatc
accggtctgccgcccgccgtgtcgctggagcagcgccggtcggcgcccggggcgcgctcc
tcggtgggcacggtcaccaccctgtccaactccctgcgcatgctgctctcgcgtgccggt
gactacccgccgggtgcggagcggctcgactccgacgccttctcgccgaacacggcggcc
ggtgcgtgccccgagtgccacggcctgggactgatccaccgcaccaccgaggaactgctc
gtccccgacccgtcgttgtcgatccgggacggagcgatcgcggcctggccgggggcctgg
cagggcaagaacctgcgcgatgtgctggacgccctcgggtacgacgtcgagcgtccgtgg
cgggagctggacacggctgaccgcgagtggatcctcttcaccgacgagcagccggtggtg
acggtccacccggtgcgtgacgcgggccggatccaacgcccctaccagggcacgtacatg
agcgcacggcggcatgtgatgcacacgttcgcggattccaggagcaggaccctgcgggcg
aaggcggagcggttcctgacgagcgcgccctgtccggtgtgcgggggcgggagactgcgg
cgggaggcgctggcggtcaccttcgccggccgtacgatcgccgagctcgtggcgctcccg
ctcacgaccctgaccgaggtgctgctggagtcgggcggcggcagcgacacggcacgggta
ctcacggccgacctgctggccaggatcgagccggtgacggagctgggcctcgggtatctc
agcctcgaccggacggcccccaccctgtcctccggcgagctgcagcggctgcggctggcc
acacagctgcggtcggggctgttcggagtcgtgtacgtactggacgagccgtcggcgggt
ctgcacccggcggacacggagtcgctgctcggcgtgctcggcaggctcagggaggcgggc
aactcggtgttcgtggtggagcaccagatggacgtggtgcgacgggccgactggctggtg
gacgtgggcccgctggccggcgagcacgggggccgggtcctgcacagcggccctccggcc
ggcctcgccggggtggacgggtcggcgacccggcggttcctcttcgacgaggacccggct
ccggcgcgcgaaccgcgcgtaccgaccgggtggatcaccctcggcggggtggacctgcac
aacgtgcgcggcgtcgacgcgacgttcccgctcggggtgctgacggcggtcaccggtgtg
tcgggatccggcaagtccaccctcgtcggacaggtcctggcgggcgtgctcgccgaccgg
cggcccgcggagtcggccgacgctccggccgtcccggtgacgcggggctgcgcgtcggcg
gagggcctggacgcggtggaccggctcgtgcaggtcgaccagcggcccatcggccgtacg
ccccgctccaacctggccacgtacacggggctgttcgacgtcgtgcggaagctcttcgcg
gagacggagacggcccgggcacggaagtaccgggcgggccggttctcgttcaatgtggcg
ggcgggcggtgcgagacctgccagggcgaggggttcgtctcggtcgagctgctcttcctg
cccagtacgtacgccccctgcccggactgtcacggcgcgcgctacaacccggcgaccctg
gaggtcaccttgcgcggtctcacgatcgcggaggtgctggacctgacggtggaggcggcg
gccgggttcctggcgggcactccggcggccgagcgcagtctgcgtgccctcctcgacgtc
gggctcggctatctgcgtctgggacagccggcgacggaactctcgggcggtgaggcgcag
cggatcaagctcgccacggagctccagcgtgcccgccgcgggcacaccctctatctgctg
gacgagccgaccaccggtctgcaccccgccgatgtggaggtcctgatgcggcagttgcac
ggcctggtggacgcggggaactcggtggtggtcgtggagcacgacatgacggtggtggcc
ggtgcggaccgggtcgtcgacatggggcccggcggcggggacgggggcgggcggatcgtc
gccaccggcacgccgagggaggtcgcacgcgcggcggggagccgtacggccgcgtacctg
gcgaaggcgctgcggccgggctga
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