Streptomyces sp. 11-1-2: CGL27_03250
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Entry
CGL27_03250 CDS
T11393
Name
(GenBank) AraC family transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
strq Streptomyces sp. 11-1-2
Pathway
strq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
strq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CGL27_03250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
strq03000
]
CGL27_03250
03400 DNA repair and recombination proteins [BR:
strq03400
]
CGL27_03250
Enzymes [BR:
strq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CGL27_03250
Transcription factors [BR:
strq03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CGL27_03250
DNA repair and recombination proteins [BR:
strq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CGL27_03250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HHH
DUF6233
DUF7437
Motif
Other DBs
NCBI-ProteinID:
ASQ92299
LinkDB
All DBs
Position
705897..707390
Genome browser
AA seq
497 aa
AA seq
DB search
MSDDSRYEAVCSRDARFDGEFFFGVATTGIYCRPSCPATTPRRKNVRFFPTSAAAQGAGF
RACRRCRPDAVPGSADWNARADAVGRAMRMIGDGVVDREGVAGLAARLGYSARQVQRQLT
AELGAGPVALARAQRAHTARILLQTTALRASEIAFAAGFSSVRQFNDTLREIYAATPTEL
RAARPAKSSLSGPAVATGGVLGTNGGTAGVPLRLAYRGPYDTTQVFDYLARRALTGLEEM
VGTPGVRTYRRTLRLPHACAIVEIDERPGDGWLECRLRLTELRDLTTAIQRIRRLFDLDA
DPYAVAERLGANAALAPLVGARPGLRSPGTADPHELAVRAVLGQQVSVAAGRVLGDALVA
AYGKPLARPDGGLTHLFPRAEDLAEAPLAELGMPESRRATLRTLATALADGTVRLDAGAD
RDRTEKELLGLRGIGPWTAGYVRMRALSDPDVLLESDVAVLAGARGAGAHLEDSEGWRPW
RSYAMHHLWNAPRARRE
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgacagcaggtacgaggcggtgtgcagccgcgacgcacggttcgacggcgag
ttcttcttcggtgtcgccacgacggggatctactgtcggccgagctgccccgcgaccacg
ccccggcgcaagaacgtccggttcttcccgacctcggccgccgcgcagggcgcggggttc
cgggcctgccgccgctgccggccggacgccgtgcccggctccgccgactggaacgcgcgg
gcggacgccgtcggccgcgccatgcggatgatcggggacggagtggtggaccgggaggga
gtggccgggctcgccgcgcggctcggctacagcgcccggcaggtgcagcggcaactgacc
gccgagctcggcgccgggccggtcgcgctcgcccgcgcgcagcgcgcccacaccgcgcgg
atcctgctgcagaccaccgccctgcgggcctcggagatcgcgttcgcggccgggttctcc
agcgtccggcagttcaatgacacgctccgcgagatatacgccgccacccccaccgagctg
cgtgccgcccggcccgcgaagtcctccctgtccgggcccgcggtggccaccggcggggtg
ctggggacgaacggcgggacggccggggtgccgctgcggctcgcctaccgcggcccgtac
gacaccacgcaggtcttcgactatctcgcccggcgcgccctcaccggcctggaggagatg
gtgggcaccccaggcgtccggacctaccgccgcaccctgcggctgccgcacgcctgcgcc
atcgtcgagatcgacgaacggcccggtgacggctggctggagtgccggctgcgcctgacc
gagctgcgcgatctgaccaccgccatccagcggattcggcgcctgttcgacctggacgcc
gatccgtacgcggtcgccgagcgcctcggcgccaacgccgcgctcgcgcccctggtgggc
gcacggccgggactgcgttccccgggcaccgccgacccccatgaactcgccgtgcgcgcc
gtgctcggccagcaggtctcggtggccgccgggcgcgtgctgggcgatgcgctggtcgcc
gcgtacgggaaaccgctggcgcggcccgacggcgggctcacgcatctcttcccgcgcgcg
gaggacctggccgaggcaccgctcgcggagctcggcatgccggagagccgacgcgccacg
ctgcgcacgctcgccaccgcgctcgcggacggcacggtgcggctggacgccggcgccgac
cgcgaccggaccgagaaggaactcctggggctgcgtggcatcggtccctggacggccggc
tacgtccggatgcgggcactgagcgaccccgatgtgctgttggagtcggatgtcgccgta
ctggccggggcccgcggcgccggggcgcatctggaggactccgagggctggcggccctgg
cgctcgtacgccatgcaccacctgtggaacgccccgcgggcccggcgcgagtga
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