Streptomyces sp. 11-1-2: CGL27_18325
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Entry
CGL27_18325 CDS
T11393
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
strq Streptomyces sp. 11-1-2
Pathway
strq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
strq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CGL27_18325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strq03400
]
CGL27_18325
Enzymes [BR:
strq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CGL27_18325
DNA repair and recombination proteins [BR:
strq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CGL27_18325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
HHH_RecD2
AAA_30
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
NAT10_TcmA_helicase
NPHP3_N
PhoH
PIF1
AAA_16
TraI_hel_assoc_N
nSTAND3
AAA
DEAD
UvrD-helicase
HTH_IclR
TrwB_AAD_bind
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ASQ94762
LinkDB
All DBs
Position
complement(4501518..4503761)
Genome browser
AA seq
747 aa
AA seq
DB search
MLKLAVVEGVLERITYANEENGYTVARVDTGRGSGDLLTVVGSLLGAQPGESLRMEGRWG
SHPQYGKQFTVENYQTVLPATVQGIRRYLGSGLIKGIGPRIADRITEHFGVDTLDVIEER
PERLVEVPGLGPKRTKMIAAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYGDASISVV
KNEPYRLAADVWGIGFLTADKIAQSVGIPHDSPDRVKAGLQYALSQSADQGHCYLPEEQL
IADAVKLLQVDTGLVIDCLGELAAEDEGVVREPVPGPADGEPVSAVYLVPFHRAEISLAG
QVLRLLRTQEDRLPAFGDVDWDKALDWLASRTGADLAPEQSQAVRLALTEKVAVLTGGPG
CGKSFTVRSVVELARAKKAKVVLAAPTGRAAKRLSELTGAEASTVHRLLELRPGGDAAYD
RDRPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGDVDQLPSVGAGEVLRDLLAP
GSPVPAVRLTRIFRQAQQSGVVTNAHRINEGVPPVTQGLSDFFLFVEDDTEEAGRLTVDV
AARRIPAKFGLDPRRDVQVLAPMHRGPAGAGTLNGLLQQAITPARPDLPERRLGGRVFRV
GDKVTQIRNNYEKGANGVFNGTVGVVTSLDTDEQRLTVRTDEDEEVPYDFDELDELAHAY
AVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKRLVVLVGSRRALGQAVRTVS
AGRRCTALDHRLGGDVTVERVKRVSER
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaactcgcggtggtcgaaggggtcctggagcggatcacctacgccaatgaggag
aacggctatacggtcgcgcgggtcgacaccggccggggctccggcgatctgctgaccgtc
gtcggctcgctgctgggcgcccagccgggcgagtcactgcggatggagggccgctggggt
tcccatccgcaatatggcaaacagttcaccgtcgagaactaccagaccgtcctccccgcc
accgtccagggcatccggcgctatctcggctcggggctgatcaagggcatcggcccccgg
atcgccgaccggatcaccgagcacttcggcgtcgacaccctcgatgtcatcgaggagcgg
cccgagcggctggtcgaggtcccgggcctcggccccaagcgcaccaagatgatcgccgcg
gcctgggaggagcagaaggccatcaaggaggtgatggtcttcctccagggggtgggcgtc
tccacctccatcgcggtgcggatctacaagaagtacggcgacgcgtcgatttcggtcgtg
aagaacgagccgtaccggctggcggccgacgtctggggcatcggcttcctcaccgccgac
aagatcgcccagtcggtgggcattccgcatgacagccccgaccgggtgaaggccggcctg
cagtacgcgctgtcccagtccgccgaccagggccactgctatctccccgaggagcaactc
atcgcggacgccgtgaagttgctccaggtggacaccggtctggtcatcgactgcctgggg
gagctcgcggccgaggacgagggcgtggtgcgcgagccggtcccgggcccggcggacggc
gagccggtatccgccgtctatctggtgcccttccaccgcgccgagatctccctcgccggc
caggtgctgcggctgctgcgcacccaggaggaccggctgcccgccttcggggacgtggac
tgggacaaggcgctggactggctggcgagccgcaccggagccgatctggcgcccgagcag
agccaggcggtgcggctcgcgctgaccgagaaggtcgcggtgctcaccggcgggccgggc
tgcggcaagtccttcaccgtgcggtccgtggtggagctggcccgcgccaagaaggcgaag
gtggtgctcgcggcgcccaccggccgggccgccaagcggctgtccgagctgaccggcgcc
gaggcgtccaccgtccaccggctgctggagctcaggcccggcggggacgcggcgtatgac
agggaccgcccgctcgacgcggatctggtggtggtcgacgaggcgtcgatgctcgatctg
ctgctggccaacaagctggtcaaggcggtcccgcccggcgcccatctgctcttcgtcggg
gatgtggaccagctgcccagcgtgggcgccggggaggtgctgcgcgatctgctggccccc
ggcagccccgtcccggcggtgcggctgacccggatcttccgccaggcccagcagtccggt
gtggtcaccaacgcccaccggatcaacgagggggtgccgccggtcacccagggcctgtcg
gatttctttctcttcgtcgaggacgacacggaggaggccgggcggctcacggtcgatgtc
gcggcccgccgcatccccgccaagttcggtctcgacccccgccgtgacgtgcaggttctg
gcccctatgcaccgcggcccggcgggcgcgggcacgctcaacggactgcttcagcaggcc
atcaccccggcccgcccggacctcccggagcgccgtctcggaggccgggtcttccgggtc
ggcgacaaggtgacccagatccgtaacaattatgagaaaggggccaacggggtcttcaac
ggcacggttggcgtcgtcacctcactcgacaccgatgagcagcggctgaccgtgcggacg
gacgaggacgaggaggtaccgtacgacttcgacgagctggacgagctggctcatgcctat
gcggtgaccatccaccggtcacagggcagtgagtacccggccgtcgtgattccggtgacc
accggggcctggatgatgttgcagcgcaacctcctgtacacggcggtgacccgtgccaag
cgccttgtggtgctggtcggctcgcgccgcgcgctggggcaggcggtgcgcaccgtctcg
gcggggaggcgctgtaccgcgctggatcaccgactcggcggcgatgtgacagtcgagcgt
gtcaagagggtttccgaacgatga
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