Streptomyces sp. 11-1-2: CGL27_21870
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Entry
CGL27_21870 CDS
T11393
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
strq Streptomyces sp. 11-1-2
Pathway
strq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
strq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGL27_21870 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strq03019
]
CGL27_21870 (groL)
03110 Chaperones and folding catalysts [BR:
strq03110
]
CGL27_21870 (groL)
03029 Mitochondrial biogenesis [BR:
strq03029
]
CGL27_21870 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
strq04147
]
CGL27_21870 (groL)
Enzymes [BR:
strq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CGL27_21870 (groL)
Messenger RNA biogenesis [BR:
strq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CGL27_21870 (groL)
Chaperones and folding catalysts [BR:
strq03110
]
Heat shock proteins
HSP60 / Chaperonin
CGL27_21870 (groL)
Mitochondrial biogenesis [BR:
strq03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CGL27_21870 (groL)
Exosome [BR:
strq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CGL27_21870 (groL)
Exosomal proteins of other body fluids (saliva and urine)
CGL27_21870 (groL)
Exosomal proteins of breast cancer cells
CGL27_21870 (groL)
Exosomal proteins of colorectal cancer cells
CGL27_21870 (groL)
Exosomal proteins of bladder cancer cells
CGL27_21870 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4844
CbiA
AIM3_BBC1_C
Motif
Other DBs
NCBI-ProteinID:
ASQ95365
LinkDB
All DBs
Position
complement(5314545..5316170)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKIIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDAYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGANPMALKRGIE
KAVEAVSAQLLEQAKDVETKEQIASTASISAADTQIGELIAEAMDKVGKEGVITVEESQT
FGLELELTEGMRFDKGYISPYFATDMERMESSLDDPYILIVNSKISSVKDLLPLLEKVMQ
SGKPLLIIAEDVEGEALATLVVNKIRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGTVIS
EEVGLKLENAGLDLLGRARKVTVTKDETTIVDGAGDTDQVQGRVNQIRAEIESSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQT
VSVFEKLELEGDEATGAQAVRLALEAPLKQIAVNAGLEGGVVVEKVRNLTPGHGLNAATG
EYVDLIAEGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEKAAPAGAPGGMPGGDMD
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcgacgaggaggcgcggcgcggcctcgagcgcgggatgaac
cagctcgccgacgccgtcaaggtcaccctcggccccaagggccgtaacgtcgtcctcgag
aagaagtggggcgcccccacgatcaccaacgatggtgtttccatcgccaaggagatcgag
ctcgaggacgcgtacgagaagatcggcgccgagctggtcaaggaggtcgcgaagaagacg
gacgacgtcgccggtgacggcacgacgaccgcgaccgtcctcgcccaggcgctggtcaag
gagggcctccgcaacgtcgccgcgggtgccaacccgatggcgctcaagcgcggtatcgag
aaggccgtcgaggccgtctccgcccagcttctcgagcaggccaaggacgtggagaccaag
gagcagatcgcctccaccgcctccatctccgctgccgacacccagatcggtgagctcatc
gccgaggcgatggacaaggtcggcaaggaaggtgtcatcaccgtcgaggagtcgcagacc
ttcgggctcgaactcgagctcaccgagggcatgcgcttcgacaagggctacatctccccg
tacttcgcgacggacatggagcgtatggagtcgtcgctcgacgacccgtacatcctgatc
gtcaactccaagatcagcagcgtgaaggacctcctcccgctgctcgagaaggtcatgcag
tcgggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctggccaccctg
gtcgtcaacaagatccgtggcaccttcaagtccgtcgccgtcaaggccccgggcttcggt
gaccgccgtaaggccatgctcggtgacatcgccatccttaccggtggcaccgtcatctcc
gaggaggtcggcctcaagctggagaacgccgggctggacctgctcggccgcgcccgtaag
gtcaccgtcaccaaggacgagaccaccatcgtggacggcgccggcgacaccgaccaggtg
cagggccgcgtcaaccagatccgagccgagatcgagtcctcggactcggactacgaccgc
gagaagctgcaggagcgcctggcgaagctggccggcggcgtggccgtcatcaaggccggt
gccgccaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgcggtgcgcaac
gccaaggcggccgtcgaggagggcatcgtcgccggtggtggcgtggccctgctgcagacc
gtctcggtcttcgagaagctggagctcgagggcgacgaggccaccggtgcccaggccgtg
cgcctggccctggaggccccgctgaagcagatcgcggtcaacgccggtctcgagggcggc
gtcgtggtcgagaaggtgcgcaacctgaccccgggccacggcctcaacgccgcgaccggt
gagtacgtcgacctgatcgccgagggcatcatcgacccggccaaggtcacgcgctccgcg
ctgcagaacgccgcgtcgatcgccgcgctgttcctcaccaccgaggccgtcatcgccgac
aagccggagaaggccgccccggcgggcgctccgggcggcatgccgggcggtgacatggac
ttctga
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