Streptomyces sp. 11-1-2: CGL27_35655
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Entry
CGL27_35655 CDS
T11393
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
strq Streptomyces sp. 11-1-2
Pathway
strq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
strq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CGL27_35655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
strq03000
]
CGL27_35655
03400 DNA repair and recombination proteins [BR:
strq03400
]
CGL27_35655
Enzymes [BR:
strq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CGL27_35655
Transcription factors [BR:
strq03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CGL27_35655
DNA repair and recombination proteins [BR:
strq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CGL27_35655
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
ASQ97653
LinkDB
All DBs
Position
8392556..8394031
Genome browser
AA seq
491 aa
AA seq
DB search
MHTDTDRCLRAAQAKDARFDGWFFVAVVTTGIYCRPSCPVVGPKAENMRFYPSAAAAQQA
GFRACKRCRPDASPGSPQWNERADLVARAMRLIADGVVDRDGVPGLAARLGYSTRQVERQ
LLAELGAGPLALARAQRAQTARLLIETSALPMADIAFAAGFASVRAFNETVREVFALSPT
ELRQRATRGPRTSVPGALTLRLPFRAPLCPDNLFGHLAATGVPGVEEWRDGAYRRTLRLP
YGPGVVTLSPRPDHIACQLSLADLRDLAGAISRCRRLLDLDADPAAVDDLLRTDLQLAPL
VDKAPGRRVPRAVDADEFAVRAVLGQQVSTAAARTHAGRLVAAHGEPVEDPAGGLTHLFP
SVQALAGLDPETLAMPRTRRATLTGLVGALAEGRVALGVGSDWDDARAALGTLPGLGPWT
VEVIAMRALGDPDAFVPTDLGVRRAAAELGLPATPGALTRHSARWRPWRAYAVQYLWATD
AAHAINRLPAA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgacaccgaccgctgcctccgcgccgcacaggcgaaggacgcccgcttcgac
gggtggttcttcgtcgccgtcgtgaccaccgggatctactgccggccgagctgtccggtc
gtcgggcccaaggccgagaacatgcggttctaccccagcgccgcggccgcccagcaggcc
gggttccgggcctgcaagcggtgccgtccggacgccagccccgggtcgccgcagtggaac
gagcgcgccgacctcgtcgcgcgggccatgcggctgatcgccgacggcgtggtggaccgg
gacggggtgccgggcctggcggcccggctgggatacagcacccgccaggtcgagcggcag
ttgctcgccgagctcggcgcgggcccgctcgcgctggccagggcgcagcgggcgcagacc
gcccggctgctcatcgagaccagcgcgctcccgatggcggacatcgccttcgcggccggg
ttcgccagcgtccgcgcgttcaacgagaccgtacgggaggtcttcgcgctctccccgacc
gagctgcggcagcgggccacccgcgggccgcggaccagcgtgccgggggcgctcacgctg
cggctgccgttccgggcaccgctgtgcccggacaacctcttcgggcatctggccgccacc
ggcgtccccggggtcgaggagtggcgcgacggcgcctaccggcggacgctgcggctgccg
tacgggcccggggtggtcaccctgagcccgcggccggaccacatcgcctgccagctctcg
ctggccgacctccgcgacctggccggggcgatcagccgctgccggcggctgctggacctc
gacgcggacccggccgccgtggacgacctgctgcgtacggacctccaactggcgccgctg
gtcgacaaggccccggggcggcgggtgccgcgcgcggtggacgcggacgagttcgcggtg
cgcgccgtgctcggccagcaggtgtccacggccgccgcccgcacccacgccgggcgcctg
gtggcggcgcacggcgagccggtggaggacccggcgggcggcctgacccacctcttcccg
tccgtccaggccctcgccggactggaccccgagacgctggccatgccccgcacccgccgc
gccaccctcaccgggctggtcggcgcgctcgccgagggccgggtcgcacttggcgtcggc
agtgactgggacgacgcccgcgcggccctgggcacgctgccggggctcggcccctggacc
gtagaggtgatcgcgatgcgcgccctcggcgacccggacgccttcgtcccgaccgacctc
ggggtgcggcgcgccgccgccgaactggggctgcccgccacgcccggcgccctcacccgc
cactcggcgcgctggcgcccctggcgcgcgtacgccgtccagtacctctgggcgacggac
gccgcccacgccatcaaccgcctgcccgcggcatga
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