Streptomonospora litoralis: EKD16_02430
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Entry
EKD16_02430 CDS
T05863
Symbol
xthA
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
strr
Streptomonospora litoralis
Pathway
strr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
strr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EKD16_02430 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strr03400
]
EKD16_02430 (xthA)
Enzymes [BR:
strr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
EKD16_02430 (xthA)
DNA repair and recombination proteins [BR:
strr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
EKD16_02430 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QBI52302
UniProt:
A0A4V0ZJ55
LinkDB
All DBs
Position
523729..524550
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AA seq
273 aa
AA seq
DB search
MNSVRARGERIAAWLQRSDVDVAAVQETKCRDDQFPTELFTDLGYEVAHHGLSQWNGVAV
LSRVGLTDVQFGFPGQPGWGEPEAPEARALGATCGGVRVWSLYVPNGREIDDPHYSYKLR
WLEALRAYGAECLDEDPRAQMALCGDFNVAPQDDDVWDMAEFEGKTHVTKPERDAFTSVV
DAGFAEVVRPFAPGPGVYTYWDYKQLSFPKRKGMRIDFVLASPALASRVSGAMVDREERK
GKGASDHAPVMVDLDGGADQESAAADAAGLGGA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
gtgaacagtgtccgggcgcgcggcgagcggatcgcggcgtggttgcagcgcagcgacgtc
gacgtcgccgctgtccaggagaccaagtgccgcgacgaccagttccccaccgagctcttc
accgacctcggctacgaggtcgcccaccacgggctctcgcagtggaacggcgtcgcggtc
ctctcccgtgtggggctgaccgacgtgcagttcggcttccccggccagcccggatggggt
gaacccgaggctcccgaggcccgcgccctgggcgccacctgcggcggtgtgcgggtgtgg
agcctgtacgtgcccaacggccgcgaaatcgacgacccgcactactcctacaagctgcgc
tggctggaggcgctgcgcgcctacggcgccgagtgcctggacgaggacccgcgcgcgcag
atggcgctgtgcggcgacttcaacgtcgctccccaggacgacgacgtgtgggacatggcc
gagttcgaaggcaagacgcacgtgaccaagcccgagcgcgacgcgttcaccagcgtcgtc
gacgccgggttcgccgaggtggtgcgccccttcgcgcccggccccggcgtctacacctac
tgggactacaagcagctgtccttccccaagcgcaagggcatgcggatcgacttcgtactg
gcctcgcccgcgctggcgtcgcgggtctccggcgcgatggtcgaccgcgaggagcgcaag
ggcaagggggcctccgaccacgcgccggtgatggtggacctcgacggcggcgccgatcag
gagtcggcggcggccgacgcggcgggtctcggcggagcctga
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