Streptomonospora litoralis: EKD16_07290
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Entry
EKD16_07290 CDS
T05863
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
strr
Streptomonospora litoralis
Brite
KEGG Orthology (KO) [BR:
strr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
strr03009
]
EKD16_07290 (rimO)
Enzymes [BR:
strr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EKD16_07290 (rimO)
Ribosome biogenesis [BR:
strr03009
]
Prokaryotic type
ribosomal protein modification factors
EKD16_07290 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QBI53254
UniProt:
A0A4P6Q373
LinkDB
All DBs
Position
1682532..1683980
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AA seq
482 aa
AA seq
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MSSRRKVSLVTLGCARNEVDSEELAGRLESDGWDLVDSGSGEDADVVVVNTCGFIDAAKQ
DSIDALLSSAEGGAKVVAAGCMAERYGSELAKELPEAQVIGFDDYSGISERLDDVLAGRS
LTPHDPRDRRTLLPISPVERPEGAHAHVPGHASFDTLDPLPEGVAPASGPHIPRRRLAGG
PVANLKIASGCDRRCTFCAIPAFRGAYISRHPDDVVREAEWLAGQGVRELFLVSENSTSY
GKDLGDLRALEGLLPRLAAVEGIERVRVSYLQPAEIRPGLIEVLTSTPGVVPYFDLSFQH
ASEPLLRRMRRFGSRERFLELLATVRAAAPEAGVRSNFIVGFPGESDADLAELTAFLQEA
RLDAVGVFGYSDEEGTEAADHDGKLPDETITERADRLNRLAEELMAQRSEERVGSTVEVL
IEAELDDGTYEGRAAHQAPEVDGSTVVHGSGLAVGDLVRATVTEAAGADLVADASAHGPA
PR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgcgccgcaaagtctcgctcgtcaccctcggctgcgcccggaacgaggtggat
tccgaagagctcgccggacgtctcgaatcggacggatgggacctcgtcgactccggcagc
ggtgaggacgccgatgtggtggtcgtcaacacctgcggcttcatcgacgcggccaagcag
gactccatcgacgccctgctctcctcggccgaaggcggcgccaaagtcgtcgccgcaggc
tgcatggccgagcgctacggctccgaactcgccaaggagcttcccgaagcccaggtcatc
ggcttcgacgactactccggcatctccgagcgcctcgacgacgtcctcgccggccgcagc
ctcactccccacgacccgcgcgaccgccgcacactgctgccgatctccccggtcgagcgg
cccgagggcgcccacgcccacgttcccggacacgcctccttcgacacactcgacccgctg
ccggagggcgtggcaccggcgagcgggccgcacatcccgcgccgccgcctggccggggga
ccggtcgccaacctcaagatcgcctcgggttgcgaccgccgctgcaccttctgcgccatc
cccgccttccgcggtgcctacatctcgcgccaccccgacgacgtcgtccgcgaggccgag
tggctggccggacagggcgtgcgcgaactgttcctggtcagcgagaactccacctcctac
ggcaaggacctgggcgacctgcgcgcactggagggcctgctgccgcggctggccgccgtc
gagggcatcgagcgggtccgggtgagctacctccagcccgccgagatccggcccggcctg
atcgaggtgctgacctccacgcccggcgtcgtcccctacttcgacctctccttccagcac
gccagcgagccgctgctgcgccggatgcgccgcttcggctcccgcgagcgcttcctggaa
ctgctggccaccgtccgcgccgcggcccccgaggccggggtgcgctccaacttcatcgtg
ggcttccccggcgaaagcgacgccgacctcgccgagctgaccgcgtttctgcaagaggcc
cggctggacgccgtgggcgtgttcggctactccgacgaagaggggaccgaggccgccgac
cacgacggcaagctccccgacgagaccatcaccgaacgggccgaccggctcaaccggcta
gcggaggaactcatggcccaacgttccgaggagcgcgtcggctccaccgtcgaggtcctc
atcgaagcggagctggacgacggaacctacgaggggcgcgccgcccaccaggcgcccgag
gtcgacggcagcaccgtcgtgcacggcagcgggctggccgtcggcgacctcgtcagggcc
acggtcaccgaggccgcgggtgccgatctcgtcgccgacgcctccgcgcacggtccggca
ccgcgatga
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