KEGG   Streptomonospora litoralis: EKD16_07355
Entry
EKD16_07355       CDS       T05863                                 
Name
(GenBank) putative ATP-dependent helicase Lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
strr  Streptomonospora litoralis
Brite
KEGG Orthology (KO) [BR:strr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:strr03400]
    EKD16_07355
Enzymes [BR:strr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     EKD16_07355
    5.6.2.6  RNA 3'-5' helicase
     EKD16_07355
DNA repair and recombination proteins [BR:strr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    EKD16_07355
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH4_Lhr WH3_Lhr DEAD WH2_Lhr Helicase_C AbiEi_4 ResIII MarR_2 DUF6406 TrmB MarR
Other DBs
NCBI-ProteinID: QBI53267
UniProt: A0A4P6Q3K5
LinkDB
Position
complement(1694833..1699455)
AA seq 1540 aa
MVAPTGSGKTLSAFLWALDGLASAPVPEERVRRCRVLYVSPLKALAADIERNLRVPLSGI
RRAAEAAGAEVPRLSVGVRTGDTPSSERRGLATSPPDVLITTPESLFLVLTSQARAGLAG
VETVIVDEVHALAGTKRGAHLALSLERLDELLEAPAQRIGLSATVRPAEEVAAFLGGRRP
ASVVAPPNSPSLDVRIVVPVEDMNELEGSVAAGRADDRASKARTSIWPHVEERVLDLVER
NRSSIVFCNSRRVAERLCARLNELADERRGFGGDGAAAAGGSAGSGPGASSLAPGGSGPR
LSPAEVMAEAGQAYGAEAAVVARAHHGSVSKDERAVIESDLKEGRLPCVVATSSLELGID
MGAVDLVVQVESPPSVASGLQRVGRAGHHVGEVSRGVVFPKFRGDLLTASVVVERMRQGR
IEELRMPQNPLDVLAQQVVAMAAMDEWEVAALGGVVRRAAPFVSLPDSALSGVLDMLSGR
YPSDEFAELRPRLVWDRDGGGAGSGGVVSGRPGAQRLAVTSGGTIPDRGMYAVHLAGGGG
PTRVGELDEEMVYESRVGDVFVLGASAWRIERIDADRVTVSPAPGRPGRLPFWKADTQGR
PAELGRAIGVMARELSGSAESEAVERARGAGLDEWAAANLVGYLAEQAEATGRVPDERTI
VVERFRDELGDWRAVVHSPLGARVHAPWALVIGARLRERFGLDAQVVHGDDGIVVRLPDV
EEDSGGGARGRSGSAGVGLAESLVVAPEEVEDAVTAELGGSALFAARFRECAARALLLPR
RRPGRRMPLWQQRQRSAQLLSVAGRFGSFPIVLEAVRECLRDVFDVGGLAELMADVRARR
VRVVEVETQRASPFAQSLLMGYTAAFLYEGDAPLAELRAQALTLDSGLLADLLGQADLRE
LLDGEVVAEYDAWLQRLVPERRPAPDSGREGAADLLRELGPLTVEEAAERGVGAESLEEL
GGARRAVRVRLAGEWRWAAVEDAARLRDGAGVELPEWLAGAGSAEGEPEAFAGTAAAFTA
PVDDPLGDLVSRYARTHGPFTAADAASRLGVDRGAVVEVLRRLAGGGRLVEGEFRPGGQG
TEWCDADVLRALRRRSIARLRREVEPVPQRALGRFVPAWQHVGPVGAAVGAGPAAGRRLR
GPDGVFSAVESLRGAPVPASALESLVLPARVEGYAPALLDELTHAGEVLWAGAGPLAGND
GWVCLVPADEAEVLLPEPAAEDARESRAHAAVLGALREGGALFFRDIADRVTRAEGAAGV
SDAAIVGALWDLVWAGRVSNDSLAPLRALLGAGGTAHRSRSRRPVMPSRTGPPTAAGRWW
LLPEREDDPTRRLAAGTAALLDRYGVVTRGPVVAEQVRRGDRRSGGRGAGGFSAVYPVLR
GFEEAGRARRGYFVDGLGAAQFALPGAVDRLRSVADEGGGAPLVLAAADPANVYGAALPW
PAVAESAGRPGRKAGALVVLDEGAPTLYLERGGRSALTFGSGSGELERAAHAVAALVHAG
VLDSLTVERCDGAEVFGTALDAALVGAGFHATPKALRLRR
NT seq 4623 nt   +upstreamnt  +downstreamnt
gtggtggcgcccacgggttcgggcaagacgctgtcggcgttcctgtgggcgttggacggt
ctggcgtcggctccggtgcccgaggagcgggtgcggcgctgccgggtgctgtacgtgtcg
ccgctgaaggcgctggcggccgatatcgagcgcaatctgcgggtgccgctgtcgggcatc
cggcgtgcggccgaggcggcgggtgcggaggtgccgcggctgtcggtgggggtgcgtaca
ggcgatacgccgtcgtcggagcggcgggggctggccacgtcgccgccggacgtgctgatc
accactccggagtcgctgtttctggtgctgacgtcgcaggcgcgggcggggcttgcgggg
gtcgagacggtgatcgtggacgaggtgcacgcgctggcgggaacgaagcgcggcgctcat
ctggcgctgagtctggagcggttggacgagctgctggaggcgccggcgcagcggatcggg
ctgtcggcgacagtgcgcccggcggaggaggtggcggcgtttctgggcgggcggcgtccg
gcttctgtggtggcgccgccgaattcgccgtcgctggatgtgcggatcgtggtgccggtc
gaggacatgaacgagttggagggctcggtcgcggcggggagggcggatgaccgcgcgtcg
aaggcgcgcacgtcgatctggccgcatgtcgaggagcgggtgctggatctggtggagcgg
aaccggtcttcgattgtgttctgcaattcgcggcgggtggcggagcggttgtgtgcccgg
ttgaacgagttggccgatgagcgtcgtggtttcggcggcgacggggcggctgctgcgggc
ggttcggcggggtccgggcccggcgcgtcttccctcgcgccgggcggttcggggccgcgg
ttgtctccggccgaggtgatggcggaggcggggcaggcgtacggggccgaggcggctgtg
gtggcgcgggcgcaccacggttcggtgtccaaggacgagcgtgcggtgatcgagtcggat
ctgaaggaggggcggctgccgtgcgtggtggcgacgtccagtctggagctgggcatcgac
atgggtgcggtggatctggtggtgcaggtggagtcgccgccgtcggttgcgagtgggttg
cagcgggtgggccgggcgggccatcacgtgggcgaggtttcgcggggggtggtgtttccg
aagttccggggtgatctgctgacggcttcggtggtggtggagcggatgcggcaggggcgg
atcgaggagttgcggatgccgcagaatccgctggatgtgctggcgcagcaggtggtggcg
atggcggcgatggacgagtgggaggtggcggcgctgggtggggtggtgcgccgggcggct
ccgttcgtgtcgctgccggattcggcgctgtcgggggtgctggacatgttgtcggggcgg
tatccctcggacgagttcgcggagttgcggccgcgtctggtgtgggatcgcgacggcggt
ggtgcgggttcgggcggcgtggtgtcggggcgtccgggtgcgcagcggttggcggtgacc
agcggcgggacgattccggatcgggggatgtatgcggtgcatctggccggtggcggcggg
cccacgcgggtgggtgagttggacgaggagatggtctacgagtcgcgggtcggcgacgtg
ttcgtgctgggggcgagtgcgtggcggatcgagcggatcgatgcggaccgggtgacggtg
tcgccggctccggggcgtccggggcggttgccgttctggaaagcggatacgcaggggcgg
ccggcggagctggggcgggccatcggggtgatggcgcgtgagttgagcggttcggcggag
tcggaggcggtggagcgggcccgcggtgcggggttggacgagtgggcggcggccaatctg
gtggggtatctggcggagcaggcggaggcgacggggcgggtgcccgacgagcgcacgatc
gtggtggagcggttccgcgacgagttgggcgattggcgggcggtggtgcattcgccgctg
ggtgcgcgggtgcatgcgccgtgggcgctggtgatcggcgcgcggttgcgggagcgcttc
gggttggatgcgcaggtggtgcacggcgacgacgggatcgtggtgcggttgccggatgtg
gaggaggactccggcggcggtgcgcgggggcgttcgggttcggctggtgtcggtttggcg
gagtcgctggtggtggctccggaggaggtcgaggacgcggtcacggcggagctcggcggt
tcggcgctgttcgcggcgcggtttcgggagtgcgctgcgcgggcgctgctgctgccgcgg
cggcgtccggggcggcgcatgccgttgtggcagcagcggcagcgttcggcgcagctgttg
tcggtggcggggcggttcgggtcgtttccgatcgtgttggaggcggtgcgggagtgcctt
cgcgacgtgttcgacgtgggtggcctggcggagctgatggcggatgtgcgggcgcggcgg
gtgcgggtggtggaggtggagacgcagcgggcgtcgccgttcgcgcagtcgttgttgatg
gggtatacggcggcgtttctgtatgagggggacgcgccgctggcggagttgcgggcgcag
gcgctgacgttggactcggggctgctggcggatctgctggggcaggcggatctgcgggag
ttgctggacggcgaggtggtggcggagtacgacgcgtggttgcagcggttggtgccggag
cgtcggccggctcccgactcggggcgtgagggggcggcggatctgctgcgggagctgggg
ccgctgaccgtggaggaggctgccgagcggggagtgggcgcggagtcgctggaggagttg
ggcggggcaaggcgggctgtgcgggtccggttggccggcgagtggcggtgggcggcggtg
gaggacgccgcccggttgcgtgacggggcgggtgtggagctgccggagtggttggcgggg
gcgggttccgccgagggggagccggaggcgttcgcggggacggctgcggcgttcaccgcg
ccggtggatgatccgcttggcgatctggtgtcgcggtatgcgcgcacgcacggtccgttc
accgccgcggacgcggcgtcgcggttgggtgtggaccggggcgcggtggtggaggtgctg
cgccggttggcgggcggcggtcggctcgtggagggcgagttccggccgggcgggcagggc
acggagtggtgtgacgcggatgtgctgcgggcgctgcggcggcggtcgatcgcgcggttg
cggcgcgaggtggagccggtgccgcagcgggcgctggggcggttcgtgccggcgtggcag
catgtcggcccggtgggtgcggcggtgggggccgggccggcggcggggcggcggctgagg
gggcctgacggggtgttctcggcggtggagtcgctgcgcggggcgccggtgccggcgtcg
gcgctggagtcgctggtccttccggcgcgggtggaggggtatgcgccggcgttgctggac
gagttgacccatgccggtgaggtgctgtgggcgggtgcggggccgttggcgggcaacgac
ggctgggtgtgcctggttccggcggatgaggccgaggtgctgctgccggagccggctgcg
gaggatgcgcgggagtcgcgggcgcatgcggcggtgctgggggcgctgcgcgagggcggt
gcgctgttcttccgcgacatcgccgaccgggtgacgcgtgccgagggggcggcgggggtt
tcggatgcggcgatcgtcggggcgctgtgggatctggtgtgggcgggccgggtgagcaac
gattcgctggcgccgctgcgtgcgctgctgggcgcgggtggtacggcgcatcggagcagg
tcgcggcggccggtgatgccgagccggacggggccgccgaccgcggcggggcggtggtgg
ctgctgccggagcgcgaggacgatccgacgcggcggctggcggcgggcacggcggcgctg
ttggaccgctacggggtggtgacgcgtggtccggtggtggccgagcaggtgcggcggggt
gatcgccgttcgggcgggcgcggtgccgggggtttcagtgcggtgtatccggtgctgcgc
ggtttcgaggaggcggggcgcgcgcggcgcgggtacttcgtggacgggttgggtgcggcc
cagttcgcgttgccgggcgcggtggaccggttgcggtcggtcgccgatgagggcggcggg
gctccgttggtcttggcggcggccgatccggcgaacgtctacggtgcggctctgccgtgg
ccggcggtggcggagtcggcggggcgcccggggcgcaaggcgggcgctttggtggtgctg
gacgagggcgcgccgacgctgtatttggagcgcggcggccgttcggcgctgacgttcggt
tcgggatcgggggagctggagcgcgcagcgcatgcggtggcggcgctggtgcacgcgggc
gtgctggattcgctgacggtggagcgctgcgacggggcggaggttttcggcaccgcactg
gacgcggccctggtcggcgcgggttttcacgctacgccgaaggcgttgcggttgcgccgt
tga

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