Streptomonospora litoralis: EKD16_09680
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Entry
EKD16_09680 CDS
T05863
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
strr
Streptomonospora litoralis
Brite
KEGG Orthology (KO) [BR:
strr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strr03400
]
EKD16_09680 (sbcD)
DNA repair and recombination proteins [BR:
strr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EKD16_09680 (sbcD)
Archaeal homologous recombinant proteins
EKD16_09680 (sbcD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
VWA_2
Motif
Other DBs
NCBI-ProteinID:
QBI53724
UniProt:
A0A4P6Q4H0
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Position
complement(2173803..2174954)
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AA seq
383 aa
AA seq
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MRLLHTSDWHLGRSFHRENLIDAQAAFVDHLVDTVRTERIDVVAVAGDLYDRALPPVDAV
RLFGEALRRIRDTGARAVLISGNHDSMARLDYATDLIDASGIHLRSSLESVGSPVLIDDD
HGPVAFYGIPYLEPEIARPHWGLDERGHTAVLSHAMERVRADLAARPPGTRSVVLSHAFV
SGGEPSDSERDISVGGASHVPLPVFAGTDYTALGHLHGRQTMAESVRYSGSPLAYSFSEE
HQVKGCWIVDLGPAGLASAEFAEAPVPRPVARISGRIDDLLTGERWERYTGHWLQVTLTD
PLRPAFPMDRLRERFPHTLVLDFAPDDRRPEDDRSWSRRTADRSESDLVLDFVDWARGEP
ATGAERDLVSAAFEDIRRREAAR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcttgcacacctccgactggcatctgggacgctccttccaccgcgagaacctc
atcgacgcccaggcggcgttcgtcgaccacctcgtcgacaccgtccgcacggagcgcatc
gacgtcgtcgcggtcgccggcgacctctacgaccgcgccctgccgcccgtggacgccgtg
cggctgttcggcgaggcgctgcgccgcatccgcgacaccggcgcgcgggcggtgctgatc
agcggcaaccacgactccatggcccgcctcgactacgccaccgacctcatcgacgcctcc
ggcatccacctgcgctcctccctggagtccgtcggctcgccggtgctgatcgacgacgac
cacggcccggtcgccttctacggcatcccctacctggaacccgagatcgcccgcccgcac
tgggggctcgacgagcgcggccacacggcggtgctgagccacgcgatggagcgcgtgcgc
gccgacctcgccgcgcgcccgcccggtacccgctcggtggtgctctcccacgccttcgtc
agcggcggcgagccctccgacagcgaacgcgacatctccgtcggcggcgcctcgcacgtt
ccgctgccggtgttcgcgggcaccgactacaccgcgctgggccacctgcacggccgccag
accatggccgagtccgtgcgctactccggctcgccgctggcctactccttctccgaggag
caccaggtcaaaggctgctggatcgtcgacctcggcccggcggggctcgcctccgccgag
ttcgccgaagccccggtgccgcgcccggtcgcccgcatcagcggccgcatcgacgacctg
ctcaccggcgagcgctgggagcgctacaccggccactggctgcaggtcaccctcaccgac
ccgctgcgcccggccttcccgatggaccggctgcgtgaacggttcccgcacaccctggtg
ctcgacttcgcccccgacgaccgccgccccgaggacgaccgcagctggtcgcggcgcacg
gccgaccgctccgagtccgacctggtgctggacttcgtcgactgggcgcgcggcgagccc
gccaccggcgcggagcgcgacctcgtatccgccgccttcgaagacatccgccgcagggag
gccgcccgctga
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