Streptomonospora litoralis: EKD16_11790
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Entry
EKD16_11790 CDS
T05863
Symbol
ykoV
Name
(GenBank) putative DNA repair protein YkoV
KO
K10979
DNA end-binding protein Ku
Organism
strr
Streptomonospora litoralis
Pathway
strr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
strr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
EKD16_11790 (ykoV)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strr03400
]
EKD16_11790 (ykoV)
DNA repair and recombination proteins [BR:
strr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
EKD16_11790 (ykoV)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Rho_N
Motif
Other DBs
NCBI-ProteinID:
QBI54141
UniProt:
A0A4P6Q499
LinkDB
All DBs
Position
complement(2659356..2660465)
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AA seq
369 aa
AA seq
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MASPVWKGTLTFGLVSLPVRLFSARERHGTRFHQFQRGTSDRIRYRRVNERTGKEVDSSE
IVRGTKADPSAGGGDEYIIVEPSELEEIAPGRSSSLEIGAFVPAGEVEALWYDSAYYVAP
DSKGSAKPYRLLCRALERSQRLGLTTLVMRERQHLAVIGPQNGVLTLSTLWWADEIRDPE
ETLPNIPAADLGERDLELAEQLIGAMADEWTPEEYGDDYQQRIDELVRAKSTGERVRYAE
EGPPPETNVVELTEALRASLRSGEEGAGAASGGTGGRRGAKTGNGGGRSAKTGGAKTGGG
SGGGRGGARGRGGTAAPEQREAPVAELSKRELARLATELGIAGRSKMSRAELEEAVERAR
AGGSARSAS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcctctccggtgtggaaggggacgctgacgttcgggctggtgagcctgccggtccgg
ctgttcagcgcccgcgagcgccacggcacgcggttccaccagttccagcgcggcacctcc
gaccgcatccgctaccggcgggtgaacgagcgcaccggcaaagaggtggactcctccgag
atcgtccgcggcaccaaggccgacccctccgcgggcggcggcgatgagtacatcatcgtc
gagccctccgagctggaggagatcgcaccggggcgctccagctcgctggagatcggcgcg
ttcgtccccgccggcgaggtggaggcgctctggtacgactccgcctactacgtcgcgccg
gactccaagggctcggccaagccctaccggctgctgtgccgggctctggagcgttcgcag
cggctggggctgaccacgctggtcatgcgcgagcgccagcacctggcggtcatcggcccg
cagaacggcgtcctgacgctgagcaccctgtggtgggccgacgagatccgcgaccccgag
gagacgctgcccaacatcccggcggcggatttgggtgagcgcgacctggagctggccgag
cagctgatcggcgcgatggccgacgagtggacgcccgaagagtacggcgacgactaccag
cagcgcatcgacgagctggtccgggccaagagtacgggcgagcgggtgcgctatgccgag
gaggggccgccgccggagaccaacgtggtggagctcaccgaggcgctgcgggccagcctg
cgctccggggaggaaggcgcgggcgccgcctccggcgggacgggcggcaggcggggcgcg
aagaccggcaacggaggcggccgctccgcgaagaccggcggcgcgaaaaccggcggcggt
tcgggcggcgggcgaggcggcgcgcggggccgcggcggcaccgcggcccccgaacagcgc
gaggcgccggtggcggagctgtccaagcgggagctggcgcgcctggcaaccgaactcggc
atcgcgggccggtccaagatgtcgcgcgccgaactggaggaggccgtcgagcgcgcccgc
gcgggcggctcggcccggtcggcgtcctag
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