Streptomonospora litoralis: EKD16_13600
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Entry
EKD16_13600 CDS
T05863
Symbol
sigF2
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
strr
Streptomonospora litoralis
Brite
KEGG Orthology (KO) [BR:
strr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strr03021
]
EKD16_13600 (sigF2)
Transcription machinery [BR:
strr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EKD16_13600 (sigF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_24
HTH_28
HTH_Crp_2
LexA_DNA_bind
Sigma70_ECF
DUF7343
MarR
GerE
HTH_AsnC-type
SAMD1_WH
Motif
Other DBs
NCBI-ProteinID:
QBI54502
UniProt:
A0A4V0ZJS5
LinkDB
All DBs
Position
3087765..3088619
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AA seq
284 aa
AA seq
DB search
MNTSSALRERETAVPRPRSSRGGGHHGNSKTDEAYYARTRELFAQLKSGETGPAEHEEIY
RNLVDLHAPVVRRIARRYRNRGEPEEDLRQVVTVGLVQAIRDFKPDYGKEFISYALPMMT
GEVKRHFRDRTWAIRVPRKYQEKRPELNRVTSSFAQEHGRSPTVAEIAERLEMSVDDTLE
LIDASSAYSALSLDVPYGAEEEDKTLGDTLGEEDHELENAADRASLRPALATLSPRDRRI
VLLRFAGNKTQAEIAQIVGLSQMHVSRTLSASLAKLRKQLVPDV
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaacacatcgagcgcgctccgcgaacgagagaccgcagtaccgcgtccgcgcagttcc
cgtggtggaggccaccacgggaacagtaaaaccgacgaagcctactacgcccgcactcgc
gagctgttcgcgcagctcaagagtggtgagacggggccggccgagcacgaggagatctat
cggaacctggtggatctgcacgctccggtcgtccgccgcatcgcccgccgctaccgcaat
cgcggcgagcccgaggaggacctgcgccaggttgtgacagtcggcctggtccaggcgatc
cgcgacttcaagcccgactacggcaaggagttcatctcctacgccctgcccatgatgacc
ggtgaggtcaagcgccacttccgggaccgcacatgggcgattcgggtgccgcgcaagtat
caggagaagcggcccgagctcaaccgggtgacctcgtcgttcgcccaggagcacggccgt
tcgccgacggtcgccgagatcgccgagcggctggagatgagtgtcgacgacactctggag
ctgatcgacgcgtcctcggcctacagcgccctgtccctggacgtgccctacggggccgag
gaggaggacaagacgctgggggacacgctcggcgaggaggaccacgagctggagaacgcc
gccgaccgggcgtcgttgcgtccggcgctggccaccctctcgccgcgcgaccggcggatc
gtgctcctgcgcttcgcggggaacaagacccaggccgagatcgcgcagatcgtgggtctg
tctcagatgcacgtctcgcggacgctctcggcgtccctggccaagctgcgcaagcagctc
gtcccggacgtgtga
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