KEGG   Streptomonospora litoralis: EKD16_17610
Entry
EKD16_17610       CDS       T05863                                 
Symbol
nrdJ
Name
(GenBank) Vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
strr  Streptomonospora litoralis
Pathway
strr00230  Purine metabolism
strr00240  Pyrimidine metabolism
strr01100  Metabolic pathways
strr01232  Nucleotide metabolism
Module
strr_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
strr_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:strr00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    EKD16_17610 (nrdJ)
   00240 Pyrimidine metabolism
    EKD16_17610 (nrdJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:strr03400]
    EKD16_17610 (nrdJ)
Enzymes [BR:strr01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     EKD16_17610 (nrdJ)
DNA repair and recombination proteins [BR:strr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    EKD16_17610 (nrdJ)
SSDB
Motif
Pfam: Ribonuc_red_lgC LAGLIDADG_3 Ribonuc_red_2_N Intein_splicing Ribonuc_red_lgN LAGLIDADG_WhiA DUF1421 Peptidase_C41
Other DBs
NCBI-ProteinID: QBI55290
UniProt: A0A4P6Q4U0
LinkDB
Position
complement(4090199..4095415)
AA seq 1738 aa
MTETASGAQRKGKDRRKGLKMERVFTKPGVHPYDAVEWERRDVVMTNWRDGSVNFEQRGV
EFPAAWTMNATQIVASKYFRGAQGTPEREWSLKQLVDRVAGTYTETGRASGYFATDEDAE
IFDHELKHALVNQLFSFNSPVWFNVGTASKQQVSACQPYSARVSTPQGLVPIGELVESDA
VGTKVYDAHGLTRVLATKANGVKDVLRLHTKAGYTLDVTADHLVWKATGDHTGKFVTAGE
LAVGDKLQWHRRDAYGESEIDPAEIAEAALAGWLQSDGFVGQYGEGTNRSLTIEAMTVTE
EELDWVTGALDRVFPDVHRHERRVETQDTSLDCRRTRLYGSGLADFVAKWDLRTRGVDMR
VPEHLFTAPLPVVTAYLRSIFQAEGYVSKRERSVRIGMDMISEELVRGVQRLLLRYGIFA
RVARKAERRPDRNDLWSLGIQGAGERAAFAAEIGFIDAAEADKLEASLDVPGLAAHPIKR
LEIAAVENVGAMEVYDIQTESGEYLSDNLRVHNCFILSVDDTMESILDWYKEEGIIFKGG
SGAGVNLSRIRSSQELLTSGGTASGPVSFMRGADASAGTIKSGGATRRAAKMVVLDVDHP
DVEEFIETKAREEHKIRALRDAGFDVDLGGDDMFSVQYQNANNSVRVSDAFMRAVESGSE
FGLTSRTTGEVVATVDAEELFGKMARAAWECADPGVQYDDTINDWHTNPETGRISASNPC
SEYLSLDDSSCNLASINLLKFLRSDDTFDIDAFAKLTELVITAMDISITFGDFPTEKIGE
TTRAFRQLGIGYANLGALLMATGHAYDSDGGRAVAAAITSLMTGTAYKRSAELAGVVGPY
DGYAKNADAHKRVMRKHAAANDDLRTVGAMDRAISAAATATWQQCLKTGEKHGWRNAQAS
LLAPTGCLTGDSLVTTDRGLVRISELGDVYGPRWQELSTEVATDEGPRQATRFFVNGEEP
TRRIVTAGGYRIQGTYAHRIKVVDPETGAWEWKRFADITPDDVVPVQMGTLVGETRRVVL
PVLEQAYYAGDRNVVVPDAVDEELAELVGYFMGDGSLHAKGLRFCVADTDTEVVERLRIL
AKGLFNLVPDVTQMEGYQEVALSSVRLARWWKAAGFAKDLPGQNHTGKGWTPHVPSAILE
ANDPSVYAAFLRGLFEADGTVLEGVPSLSTAHESFAGEVRTLLLTLGMATTTRGTRSGYG
GDCHIVRLRNVDHALRFDELVGFMGDRKNRLMVALEPERSARGDRIMLPREVWDELVPVG
HRDRGTVVQSLRTSGGVARQLAERIHTETMDERLGHALGYIFERVADNQDGGVQPTYDIS
VPDNVTYVANGLVSHNTIGFMMDCDTTGIEPDFSLVKYKKLVGGGSMQIVNQAIPRALTN
LGYPQEQVEAIVEYISENGHVVDAPGLRPEHYEVFDCAMGRRYIKPMGHVEMMGAVQPFL
SGAISKTVNVPEEATVEDFEHIYFQGWKLGLKALAVYRDNCKVGQPLSTASTESAEKDED
KARPEPEVIEVNRPVRRRLPKKRPSETVSFSVGGAEGYITAGSYPDDGLGEVFMKLGKQG
STLAGVMDAFSIAISIALQYGVPLETYVDKFTNMRFDPAGMTDDPDIRMAQSVVDYIFRR
LALDHLPYEERADLGVLSAEERRAQANGEDPAQVAAQVESYAQSAPLTPAESAAEEGAER
SEGSGGEKRGDAHSTTELVERSQGFVADAPLCVTCGTKMRPSGSCYVCEGCGSTSGCS
NT seq 5217 nt   +upstreamnt  +downstreamnt
atgacggagaccgcaagcggagcacagcgcaaggggaaggaccgccgcaagggtctgaag
atggagcgcgtcttcaccaagcccggtgtgcacccctacgacgcggtcgaatgggagcgc
cgcgacgtcgtcatgaccaactggcgcgacggctcggtcaacttcgagcagcgcggcgtg
gagttccccgccgcttggaccatgaacgccacccagatcgtcgccagcaagtacttccgc
ggcgcccaaggcacccccgagcgcgagtggagcctcaaacagctcgtcgaccgggtcgcc
ggcacatacaccgaaaccggacgcgccagcggctacttcgccaccgacgaagacgccgag
atcttcgaccacgagctcaagcacgccctcgtgaaccagctcttcagcttcaactccccg
gtgtggttcaacgtcggcaccgcgtcaaagcagcaggtcagcgcctgccagccctacagc
gcgcgagtgagcacaccgcaagggctcgttcccatcggtgaactcgtcgagtctgacgcg
gtggggaccaaggtctatgacgcgcacggtctcacccgagtcctggcgaccaaggccaac
ggcgtcaaggacgttctgcgcttgcacaccaaggcgggctacacgctggacgtgacggcc
gatcacctggtgtggaaggcaaccggcgatcacaccggaaaattcgtcaccgcgggtgag
ctggcggtcggcgacaagctccagtggcaccggcgagacgcctatggcgaatcggagatc
gaccccgccgagatcgccgaggcggctctggccggctggctgcagtcagacggcttcgtc
gggcagtacggtgagggaaccaaccgctccctgaccatcgaggcgatgacggtcaccgag
gaggaactggactgggtgacgggagccctcgaccgggtcttccccgacgtccaccgtcac
gagcggcgcgtggagactcaggacacctccctggactgccggcgcacccgcctgtacggg
agcggtctggcggacttcgtcgccaagtgggacctgcgcacccgaggcgtcgacatgcgg
gtacccgagcacctgttcaccgcgccccttccggtggtcaccgcctacctgcggagcatc
ttccaggccgaaggctacgtttcgaagcgagagcgctccgtgcgtatcggcatggatatg
atctccgaggagcttgtccggggtgtgcagcgcctgctgctgcgctacggcatcttcgcg
cgcgtggcgcgtaaggccgagcgccgtcccgaccgcaacgacctctggagcctgggcatt
caaggtgccggggagcgtgccgcgttcgccgctgagatcgggttcatcgatgccgccgag
gcggacaagctggaggcgagcctggacgttccgggccttgcggcccacccgatcaagcgt
ctggagatcgctgcggtcgagaatgtcggcgccatggaggtctacgacatccagaccgaa
agcggcgagtatctctcggacaacctccgggtccacaactgcttcatcctctccgtggac
gacaccatggagtcgatcctcgactggtacaaggaagaggggatcatcttcaagggcggc
tccggtgccggggtgaacctctcccgcatccggtccagccaggaactgctcacctccggc
ggcaccgcctcggggccggtgtcgttcatgcgcggcgccgacgcttcggcgggcaccatc
aaatcgggcggtgcgacccgccgcgccgccaaaatggtcgtgctcgacgtcgaccacccc
gacgtcgaggagttcatcgagaccaaggcgcgtgaagagcacaagatccgtgccctgcgc
gacgccgggttcgacgtcgacctgggcggcgacgacatgttcagcgtgcagtaccagaac
gcgaacaactccgtccgggtctccgacgccttcatgcgcgccgtcgaatccggctcggag
ttcgggctgacctcgcgcaccaccggcgaggtcgtggccaccgtcgacgccgaggagctg
ttcggcaagatggcccgcgccgcctgggagtgcgccgacccgggcgtgcagtacgacgac
accatcaacgactggcacacaaaccccgaaaccggacgaattagtgcaagcaacccgtgc
agtgaatacctctcacttgatgattcttcgtgcaacctagcatcaattaatctgctcaaa
ttccttcgtagtgacgacactttcgatatcgacgcttttgcgaaactgaccgagttggtc
atcacggcgatggacatctccatcaccttcggcgacttccccacggagaagatcggcgag
acgacgcgcgccttccgtcagctgggcatcggctacgccaatctcggcgcgctgctcatg
gccaccggccatgcttacgactccgacggcgggcgcgcggtcgccgccgccatcacctcg
ttgatgaccggcaccgcctacaagcgcagcgcggaactggccggcgtggtggggccctac
gacggttatgcgaagaacgccgacgcccacaagcgcgttatgcgcaagcatgccgccgcc
aacgacgatttgcggacggtcggcgccatggaccgcgctatctccgccgcggccaccgca
acctggcagcagtgcctcaagaccggcgagaagcacggatggcgcaacgcccaggccagc
ctgctggcgcctaccggctgcctgaccggcgactccctggtcaccaccgaccgcggcctc
gtccggatctccgagctgggagacgtctacgggccgaggtggcaggagctgtccacggag
gtggcgaccgatgaaggaccgaggcaggcgaccaggttcttcgtcaacggggaggagccc
acgcggcgcatcgtcaccgccgggggctaccgcattcaaggcacctacgcacaccggatc
aaggtcgtcgatcccgagacgggagcctgggagtggaagcgcttcgccgacatcactccg
gacgatgtcgtcccggtgcagatgggcactctggtgggtgagacgcgtcgtgtagtgctg
ccggtgctggagcaggcctactacgcgggggaccgcaacgtggtcgtccccgacgcggtc
gacgaggagctcgccgagctcgtcggctacttcatgggcgacggcagtctgcacgccaag
gggttgcgtttctgcgtcgccgacaccgacaccgaggtcgtcgagcgcctccgtatcctg
gcgaaggggctgttcaacctcgtcccggatgtcacgcagatggagggctaccaggaggtg
gccctgtcgtccgtccgcctggcgcggtggtggaaggctgccggattcgccaaggacctg
cccggtcagaaccacaccggcaagggctggacgccgcatgtgccctccgcgatcctggag
gccaacgacccctccgtctacgcggcgttcctgcgggggttgttcgaggcggacggcacc
gtgttggagggcgttccgagcctgtcgacggcgcacgagtccttcgccggcgaggtccgc
acgctgctcctgacgctgggtatggcaaccacgactcgaggcacccggagcgggtacggc
ggcgactgccacatcgtgcgactgcgcaacgtcgatcacgcgctccgcttcgacgagctc
gtcggcttcatgggtgaccgcaagaatcggctcatggtcgccttggagccggaacgctcg
gccagaggggatcggatcatgctccctcgggaggtctgggacgaactggttccggtcggc
caccgcgatcgcggcaccgtagtgcagtcgctgcggaccagcggcggtgtcgcccgtcaa
ctggccgagcgtatccacaccgagaccatggacgagcggctcggccacgccctcggctac
atcttcgagcgggtcgcggacaaccaggacggcggcgtccagccgacctacgacatctcg
gtgcccgacaacgtcacctacgtggccaacggcttggtcagccataacaccatcggcttc
atgatggactgcgataccacgggtatcgaacccgatttctccctggtcaagtacaagaag
ctcgtcggcggcgggtcgatgcagatcgtgaaccaggcgatcccgcgggccctgaccaac
ctgggctacccgcaggagcaggtcgaggcgatcgtcgagtacatctccgagaacggccac
gtcgtggacgcgcccgggctgcggcccgagcactacgaggtgttcgactgcgccatgggc
aggcgctacatcaagcccatgggccacgtggagatgatgggcgcggtgcagccgttcctc
tccggggcgatctccaagacggtgaacgtgccggaggaggcgaccgtcgaggacttcgag
cacatctacttccaggggtggaagctgggcctgaaggcgctggcggtctaccgcgacaac
tgcaaggtcggccagccgctgtccacggcctccaccgagagcgctgagaaggacgaggac
aaggcgcggcccgagcccgaggtcatcgaggtcaatcgtccggtcaggcgccggctgccc
aagaagcggccgagcgagacggtgtccttctcggtgggcggcgccgagggctacatcacg
gcgggttcctaccccgacgacggcctcggcgaggtcttcatgaagctcggcaagcagggc
tccacgcttgccggggtcatggacgccttctccatcgcgatctcgatcgcgctgcagtac
ggggttccgctggagacctacgtcgacaagttcaccaacatgcgcttcgacccggcgggg
atgaccgacgatccggacatccgcatggcgcagtcggtggtcgactacatcttccgccgc
ctggcgctggaccacctgccctacgaggagcgggcggacctgggcgtcctctccgccgag
gagcgccgcgcccaggccaacggcgaggacccggcccaggtcgcggcccaggtcgagtcc
tacgcccagtcggccccgctcaccccggccgagagcgcggccgaggagggggccgagcgc
tccgagggctccggcggggagaagcgcggcgatgcgcactcgaccaccgagttggtcgag
cgcagccagggcttcgtcgccgacgctccgctgtgcgtcacctgcggcacgaagatgcgc
ccgtcgggcagctgctacgtctgcgagggctgcggttccacgagcggctgcagctaa

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